CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002714.1-P	Field mustard	plastid	97.32	98.47
AT3G29110.1	Thale cress	plastid	66.28	66.39
CDY18347	Canola	cytosol	16.28	58.43
CDY68962	Canola	cytosol	49.33	58.33
CDY70719	Canola	cytosol	33.56	57.47
CDY69236	Canola	cytosol	46.64	57.44
CDX98661	Canola	cytosol	53.52	57.27
CDY09325	Canola	plastid	25.84	57.04
CDX76471	Canola	plastid	54.36	53.73
CDY09324	Canola	plastid	53.86	53.59
CDY01639	Canola	cytosol	17.11	52.85
CDX76457	Canola	plastid	53.02	52.58
CDX98659	Canola	plastid	54.36	52.43
CDX95273	Canola	plastid	36.41	51.79
CDY54565	Canola	plastid	49.5	51.3
CDY13053	Canola	extracellular	46.98	50.63
CDY41707	Canola	plastid	48.49	49.66
CDY42473	Canola	cytosol	45.3	48.04
CDX74453	Canola	cytosol	40.77	45.76
CDY63249	Canola	cytosol	42.62	45.68
CDY14933	Canola	cytosol	36.91	45.08
CDY23121	Canola	cytosol	28.19	44.21
CDY14934	Canola	cytosol	1.17	43.75
CDY71184	Canola	cytosol	23.49	41.92
CDY67821	Canola	cytosol	13.59	41.75
CDX95274	Canola	cytosol	9.06	40.6
PGSC0003DMT400050941	Potato	cytosol	16.61	39.6
CDX82478	Canola	cytosol	34.9	38.73
CDY27296	Canola	cytosol	12.42	37.95
CDY39124	Canola	cytoskeleton, cytosol, plastid	35.57	37.92
CDX82477	Canola	plastid	18.62	37.0
VIT_18s0001g04200.t01	Wine grape	cytosol	7.38	36.97
CDX75776	Canola	plastid	36.07	36.63
CDX82475	Canola	plastid	35.07	35.97
CDY39119	Canola	plastid	36.24	35.88
CDY32356	Canola	plastid	37.08	35.65
CDX87217	Canola	plastid	35.91	35.61
CDX98470	Canola	plastid	34.56	35.27
CDY06577	Canola	cytosol	19.3	35.06
CDY02143	Canola	plastid	32.21	34.72
PGSC0003DMT400070310	Potato	cytosol	17.62	33.76
PGSC0003DMT400075074	Potato	cytosol	11.41	32.69
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	20.3	31.76
PGSC0003DMT400079785	Potato	cytosol	16.44	31.51
Solyc01g101190.2.1	Tomato	cytosol	29.03	31.34
PGSC0003DMT400047124	Potato	cytosol	15.1	28.94
CDX75775	Canola	plastid	22.99	28.31
VIT_18s0001g04510.t01	Wine grape	plastid	14.26	27.78
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.43	27.74
Solyc01g101220.1.1	Tomato	cytosol	7.72	27.38
CDY66920	Canola	cytosol	14.93	26.89
Os02t0458100-01	Rice	plastid	17.45	26.6
CDY15827	Canola	cytosol	6.88	26.45
CDY62515	Canola	cytosol	17.11	25.44
CDY54750	Canola	cytosol	17.11	25.44
CDX76827	Canola	plastid	23.83	25.4
CDX90785	Canola	plastid	25.0	25.13
CDY21487	Canola	plastid	24.83	24.87
CDY53648	Canola	cytosol	10.4	24.22
CDY53129	Canola	cytosol	10.4	24.22
CDX83208	Canola	plastid	23.99	24.03
CDY13587	Canola	plastid	23.32	23.6
CDX83560	Canola	plastid	22.32	23.54
GSMUA_Achr6P24340_001	Banana	cytosol	5.87	23.49
CDX83558	Canola	plastid	23.15	23.43
CDY68676	Canola	cytosol	14.77	23.4
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.73	23.11
GSMUA_Achr6P24330_001	Banana	cytosol	5.37	22.7
CDY13589	Canola	plastid	21.14	22.62
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	25.0	21.82
KRG93110	Soybean	mitochondrion	10.57	21.28
VIT_18s0001g05430.t01	Wine grape	cytosol	16.95	20.95
CDY68788	Canola	endoplasmic reticulum, golgi	14.6	20.71
CDY12909	Canola	cytosol	7.21	18.53
CDY61957	Canola	plastid	11.58	18.25
CDY12910	Canola	plastid	4.36	17.45

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078IKW4	UniProt:A0A078IKW4	EnsemblPlants:CDY49723
ProteinID:CDY49723	ProteinID:CDY49723.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00093715001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31045
PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EF451C	:	:	:

Description

BnaA10g11530DPutative terpenoid synthase 16 [Source:Projected from Arabidopsis thaliana (AT3G29110) UniProtKB/Swiss-Prot;Acc:Q9LVP7]

Coordinates

chrLK032855:-:24344..29114

Molecular Weight (calculated)

69318.1 Da

IEP (calculated)

6.919

GRAVY (calculated)

-0.280

Length

596 amino acids

Sequence
(BLAST)

001: MAVLGARHGS QLSLPSRTKL FREMKISRFP LTSFPRKKAK HVSLKATPTC DGRTFKKMSP SEWSNHFDYV SIDVSEMDAL KREIEALKPN VGKMFMSPKG
101: DDSVKKRILS IYLLVSLGLA YHFEDEIEES VRDAFEKIDE MMAGEEDLYT VSTIFWVFRT YGYNISSEVF TRFKEDNGKF KQCLTKDVRG MLSLYEAAHL
201: GTTTEYIMDE ALSFSSKTLA LIAEDHMFPS HLLRHIQNAL ALPQRWNMEV MVTVEYIRFY EHEVGHDEMI LKFSKLNFNL IQLHYLRELK ILIKWFKEAY
301: DFASNLPRYN REVIVEMHFF SLAMFFEPQF SRARIMQTKF YMAEMIIDDT CDRYATLPEI ESLVNSLERW APDDAMDSHP GFLKFVFKFM LDVFEDCERE
401: LRLQKRSYSV EETRDEYKLF VKSNLDLAKL APAGHVPSFE KYMEVGKVEV GGFIILASAL MGIDDMDEVQ GYGWLKSRSK LLQYLAEMLR LMNDKTGFEI
501: DMNRGYVTTG MNCYMRQYGV AEREASREFQ NMIEKTRKLM NEELLKTSDV PRRVLKTALD CARTGCIAYK AGEGVTNPRG KITKHIISLY VDKICL

Best Arabidopsis Sequence Match ( AT3G29110.1 )
(BLAST)

001: METITVFGPK HGSPLSLPSR TNMCWEMKPS RFPLTSVRGK PAKQVGLKVS ASCDRPISKL PPSKWTNYFH SVLVDVSEMD VLEREIEALK PNVREMLMSS
101: KGYDSVKKRS LMIYLLVSLG LAYHFEEEIE KSLKDGFEKI DEIIAGEDDL YTISTIFWVF RTYGYNMSSD VFRRFKEENG KFKESLIEDA RGMLSLYEAA
201: HLGTTTDYIL DEALDFASNN LVSLAEDGMC PSHLSTHIRN ALSISQHWNM EIIVAVQYIR FYEQEVGHDE MLLKFAKLNF NLVQRLYLQE VKILTKWYKD
301: QDIHSKLPPY YRPVVTEMHF FSTATFFEPQ FSHARILQTK LFMAELLVDD TCDRYATFSE VESLINSLQR WAPDDAMDTH PDYLKVVFKF ILNAFEECEK
401: ELRPQGRSYS LEQTKEEYKR FAKSNLDLAK LAQAGNVPSF EEYMEVGKDE IGAFVIVAGS LMGMDNIDAV EAYDFLKSRS KFSQSSAEIV RYLNDLAGFE
501: DDMRRGCVST GLNCYMNQYG VTETEVFREF RKMVMNTCKI MNEEFLKTTD VPLRVLKTNF SCVRSGFVGY NEGEGVTYPE GKITKYLTSL YVDQI

Arabidopsis Description

TPS16Putative terpenoid synthase 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVP7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.