CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18347	Canola	cytosol	31.61	36.75
CDY09325	Canola	plastid	45.6	32.59
CDX98659	Canola	plastid	90.67	28.32
CDX95273	Canola	plastid	51.3	23.63
VIT_18s0001g04200.t01	Wine grape	cytosol	14.51	23.53
CDY54565	Canola	plastid	68.39	22.96
CDX82477	Canola	plastid	34.72	22.33
CDX76457	Canola	plastid	68.39	21.96
CDY70719	Canola	cytosol	37.82	20.98
CDY09324	Canola	plastid	61.14	19.7
CDX76471	Canola	plastid	61.14	19.57
CDY49723	Canola	plastid	52.85	17.11
CDY42473	Canola	cytosol	49.22	16.9
CDY41707	Canola	plastid	50.78	16.84
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	26.94	16.77
CDY67821	Canola	cytosol	16.58	16.49
CDX98661	Canola	cytosol	47.15	16.34
CDY14933	Canola	cytosol	40.93	16.19
VIT_18s0001g04510.t01	Wine grape	plastid	25.39	16.01
CDY13053	Canola	extracellular	45.08	15.73
CDY63249	Canola	cytosol	43.01	14.93
CDX74453	Canola	cytosol	40.93	14.88
CDY68962	Canola	cytosol	36.79	14.09
Os02t0458100-01	Rice	plastid	27.98	13.81
PGSC0003DMT400050941	Potato	cytosol	17.62	13.6
PGSC0003DMT400075074	Potato	cytosol	14.51	13.46
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	17.1	13.15
CDY23121	Canola	cytosol	23.83	12.11
CDY27296	Canola	cytosol	11.92	11.79
CDX82478	Canola	cytosol	32.12	11.55
VIT_18s0001g05430.t01	Wine grape	cytosol	27.46	11.0
CDY39119	Canola	plastid	34.2	10.96
CDX75776	Canola	plastid	33.16	10.9
CDY39124	Canola	cytoskeleton, cytosol, plastid	30.57	10.55
CDY69236	Canola	cytosol	26.42	10.54
KRG93110	Soybean	mitochondrion	16.06	10.47
CDX87217	Canola	plastid	32.12	10.32
CDY12910	Canola	plastid	7.77	10.07
CDY32356	Canola	plastid	31.61	9.84
CDY68788	Canola	endoplasmic reticulum, golgi	21.24	9.76
CDY15827	Canola	cytosol	7.77	9.68
Solyc01g101190.2.1	Tomato	cytosol	27.46	9.6
CDX82475	Canola	plastid	27.98	9.29
CDX98470	Canola	plastid	27.98	9.25
CDX75775	Canola	plastid	22.8	9.09
PGSC0003DMT400047124	Potato	cytosol	14.51	9.0
CDY68676	Canola	cytosol	17.1	8.78
CDY02143	Canola	plastid	23.32	8.14
CDY61957	Canola	plastid	15.54	7.94
Solyc01g101220.1.1	Tomato	cytosol	6.74	7.74
CDY13589	Canola	plastid	21.76	7.54
CDX90785	Canola	plastid	21.76	7.08
CDY13587	Canola	plastid	21.24	6.96
CDX83558	Canola	plastid	21.24	6.96
CDY21487	Canola	plastid	21.24	6.89
CDX83208	Canola	plastid	20.73	6.72
CDY14934	Canola	cytosol	0.52	6.25
CDX83560	Canola	plastid	17.62	6.02
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	21.24	6.0
CDX76827	Canola	plastid	16.58	5.72
CDY06577	Canola	cytosol	8.81	5.18
CDY62515	Canola	cytosol	4.15	2.0
CDY54750	Canola	cytosol	4.15	2.0
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	3.63	1.84
CDY12909	Canola	cytosol	2.07	1.72
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
PGSC0003DMT400070310	Potato	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0
PGSC0003DMT400079785	Potato	cytosol	0.0	0.0
CDX95274	Canola	cytosol	0.0	0.0
CDY71184	Canola	cytosol	0.0	0.0
CDY53129	Canola	cytosol	0.0	0.0
CDY66920	Canola	cytosol	0.0	0.0
CDY53648	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:35.1	GO:A0A078ELM2	EnsemblPlants:CDY01639	ProteinID:CDY01639
ProteinID:CDY01639.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00112695001	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397
PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EDC2AF	:	:	:	:	:

Description

BnaC07g36290D

Coordinates

chrLK031927:-:1152998..1156284

Molecular Weight (calculated)

22196.9 Da

IEP (calculated)

7.618

GRAVY (calculated)

-0.370

Length

193 amino acids

Sequence
(BLAST)

001: MSVPTKPPKF VRLKATTSMT CDDQESNRTF KELLPSPWTD QFHSIFVDVS EIDALRKEID VLKPKVKKAL MSYQGIDSAK KRLLMIYLLK EEMIEGENDM
101: YTVSIIFWVF RRYDTEIHKG QTKDNGNFKE SLVGDAKGML SLYEAAYLRT TKDYIMDEAL IFTSRHLESL AADGTCPPHL SVRIRNALTL PQH

Best Arabidopsis Sequence Match ( AT1G66020.2 )
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEVT NQTLLCNYD

Arabidopsis Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.