CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18347	Canola	cytosol	27.3	57.23
CDY68962	Canola	cytosol	81.61	56.35
CDX98661	Canola	cytosol	89.66	56.01
CDY69236	Canola	cytosol	75.57	54.34
CDX95273	Canola	plastid	50.57	42.0
CDY67821	Canola	cytosol	22.7	40.72
VIT_18s0001g04200.t01	Wine grape	cytosol	13.51	39.5
PGSC0003DMT400050941	Potato	cytosol	28.16	39.2
CDY27296	Canola	cytosol	21.26	37.95
CDY01639	Canola	cytosol	20.98	37.82
PGSC0003DMT400075074	Potato	cytosol	22.13	37.02
AT4G20210.1	Thale cress	plastid	61.21	35.5
CDY14933	Canola	cytosol	47.41	33.81
CDX76457	Canola	plastid	58.33	33.78
CDY09325	Canola	plastid	26.15	33.7
CDY54565	Canola	plastid	55.46	33.57
CDY49723	Canola	plastid	57.47	33.56
CDX74453	Canola	cytosol	51.15	33.52
CDX76471	Canola	plastid	56.9	32.84
Solyc01g101220.1.1	Tomato	cytosol	15.8	32.74
CDX98659	Canola	plastid	57.76	32.52
CDX82477	Canola	plastid	27.87	32.33
CDY09324	Canola	plastid	55.46	32.22
CDY23121	Canola	cytosol	34.2	31.32
CDY41707	Canola	plastid	51.44	30.76
CDY13053	Canola	extracellular	48.56	30.56
CDY63249	Canola	cytosol	48.56	30.4
PGSC0003DMT400047124	Potato	cytosol	26.15	29.26
CDY42473	Canola	cytosol	44.83	27.76
CDY15827	Canola	cytosol	12.36	27.74
CDX82478	Canola	cytosol	40.52	26.26
CDX75776	Canola	plastid	41.67	24.7
CDX75775	Canola	plastid	33.33	23.97
CDX87217	Canola	plastid	40.8	23.63
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	20.98	23.55
CDY06577	Canola	cytosol	22.13	23.48
CDY39119	Canola	plastid	40.52	23.42
CDY39124	Canola	cytoskeleton, cytosol, plastid	37.36	23.26
VIT_18s0001g04510.t01	Wine grape	plastid	20.4	23.2
CDY71184	Canola	cytosol	22.13	23.05
Os02t0458100-01	Rice	plastid	25.86	23.02
Solyc01g101190.2.1	Tomato	cytosol	36.21	22.83
CDY32356	Canola	plastid	39.66	22.26
CDX82475	Canola	plastid	37.07	22.2
CDY68676	Canola	cytosol	23.85	22.07
KRG93110	Soybean	mitochondrion	18.1	21.28
CDX98470	Canola	plastid	35.06	20.89
CDY02143	Canola	plastid	32.76	20.61
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	14.66	20.32
PGSC0003DMT400070310	Potato	cytosol	16.67	18.65
CDY68788	Canola	endoplasmic reticulum, golgi	21.55	17.86
VIT_18s0001g05430.t01	Wine grape	cytosol	24.71	17.84
PGSC0003DMT400079785	Potato	cytosol	15.8	17.68
CDY61957	Canola	plastid	18.1	16.67
CDX90785	Canola	plastid	26.15	15.35
CDY21487	Canola	plastid	26.15	15.29
CDX83208	Canola	plastid	25.86	15.13
CDY62515	Canola	cytosol	17.24	14.96
CDY54750	Canola	cytosol	16.95	14.71
CDX76827	Canola	plastid	23.28	14.49
CDY66920	Canola	cytosol	13.22	13.9
CDY12909	Canola	cytosol	9.2	13.79
CDX83558	Canola	plastid	23.28	13.75
CDY13587	Canola	plastid	22.7	13.41
CDX83560	Canola	plastid	21.55	13.27
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	25.29	12.88
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	14.08	12.86
CDY13589	Canola	plastid	20.4	12.75
CDY14934	Canola	cytosol	0.57	12.5
CDY12910	Canola	plastid	4.89	11.41
CDY53129	Canola	cytosol	6.61	8.98
CDY53648	Canola	cytosol	6.61	8.98
GSMUA_Achr6P24340_001	Banana	cytosol	1.15	2.68
CDX95274	Canola	cytosol	0.86	2.26
GSMUA_Achr6P24330_001	Banana	cytosol	0.86	2.13

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078JV88	UniProt:A0A078JV88	EnsemblPlants:CDY70719
ProteinID:CDY70719	ProteinID:CDY70719.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00006931001	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EF2953	SEG:seg	:	:	:	:

Description

BnaC07g50220DBnaC07g50220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JV88]

Coordinates

chrLK043056:-:241..1667

Molecular Weight (calculated)

40547.7 Da

IEP (calculated)

5.290

GRAVY (calculated)

-0.206

Length

348 amino acids

Sequence
(BLAST)

001: MLMSSSPAEL GHGSAKRKVL LIYLMTSLGV AYHFEKEIEK TLAHAFEKID DMIANEHELY TISILFWVFR TYGYNMSADA FKRFKGDDGM FMDSLAKDAK
101: GMLSLYEAAH LRTTRDYIMD EALSFTMKHM ESLAGQVRPH LSRLIQNALG LSQHWNMEIL VAMEFVSFYE QEEDHDETLL KFSKLNFKLL QLTYLKELKM
201: VTKWYKELDF ASKLPPYFRD RIVELHFFVI SMYFEPQFSS ARIMLTKFYT VETITDDTFD RYASISEAEN LANSLERWAP DKDMDTQPDY LKFVFTFILD
301: VFKDFEGEVG SEGRYYSVKG AIEEVTNQNS LVNCIHLYQS ILKASPSK

Best Arabidopsis Sequence Match ( AT1G66020.2 )
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEVT NQTLLCNYD

Arabidopsis Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.