CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69236	Canola	cytosol	90.67	94.42
CDY70719	Canola	cytosol	56.35	81.61
CDX98661	Canola	cytosol	83.93	75.94
CDY18347	Canola	cytosol	19.44	59.04
AT4G20210.1	Thale cress	plastid	61.51	51.67
CDX76457	Canola	plastid	61.11	51.25
CDY23121	Canola	cytosol	38.1	50.53
CDX95274	Canola	cytosol	13.1	49.62
CDY49723	Canola	plastid	58.33	49.33
CDX98659	Canola	plastid	58.53	47.73
CDY54565	Canola	plastid	54.37	47.65
CDX76471	Canola	plastid	56.35	47.1
CDY09324	Canola	plastid	55.95	47.08
CDX74453	Canola	cytosol	49.4	46.89
CDY71184	Canola	cytosol	30.75	46.41
CDY41707	Canola	plastid	52.78	45.7
CDY14933	Canola	cytosol	44.25	45.7
CDY63249	Canola	cytosol	49.01	44.42
CDX95273	Canola	plastid	36.9	44.39
CDY13053	Canola	extracellular	48.41	44.12
CDY42473	Canola	cytosol	48.41	43.42
CDY67821	Canola	cytosol	16.27	42.27
CDY06577	Canola	cytosol	27.18	41.77
PGSC0003DMT400050941	Potato	cytosol	20.44	41.2
VIT_18s0001g04200.t01	Wine grape	cytosol	9.33	39.5
CDY27296	Canola	cytosol	14.88	38.46
PGSC0003DMT400075074	Potato	cytosol	15.87	38.46
CDX82478	Canola	cytosol	40.87	38.36
CDY39124	Canola	cytoskeleton, cytosol, plastid	42.06	37.92
CDY14934	Canola	cytosol	1.19	37.5
CDY01639	Canola	cytosol	14.09	36.79
CDX87217	Canola	plastid	42.86	35.94
CDX75776	Canola	plastid	41.27	35.43
CDY39119	Canola	plastid	42.26	35.38
CDY09325	Canola	plastid	18.65	34.81
CDY02143	Canola	plastid	37.9	34.54
CDX98470	Canola	plastid	39.88	34.42
CDY32356	Canola	plastid	42.06	34.19
PGSC0003DMT400070310	Potato	cytosol	20.83	33.76
CDX82475	Canola	plastid	38.89	33.73
PGSC0003DMT400079785	Potato	cytosol	20.24	32.8
CDX82477	Canola	plastid	19.25	32.33
Solyc01g101220.1.1	Tomato	cytosol	10.71	32.14
Solyc01g101190.2.1	Tomato	cytosol	34.13	31.16
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	23.02	30.45
CDY15827	Canola	cytosol	9.13	29.68
PGSC0003DMT400047124	Potato	cytosol	17.86	28.94
CDY66920	Canola	cytosol	17.86	27.19
CDY54750	Canola	cytosol	20.24	25.44
CDX75775	Canola	plastid	24.21	25.21
CDY62515	Canola	cytosol	20.04	25.19
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.08	24.52
CDX90785	Canola	plastid	28.57	24.28
GSMUA_Achr6P24330_001	Banana	cytosol	6.75	24.11
CDX76827	Canola	plastid	26.59	23.97
CDY68676	Canola	cytosol	17.86	23.94
VIT_18s0001g04510.t01	Wine grape	plastid	14.48	23.86
CDY53648	Canola	cytosol	12.1	23.83
CDY53129	Canola	cytosol	12.1	23.83
CDY21487	Canola	plastid	26.98	22.86
GSMUA_Achr6P24340_001	Banana	cytosol	6.75	22.82
Os02t0458100-01	Rice	plastid	17.66	22.76
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	11.31	22.71
CDX83208	Canola	plastid	26.59	22.52
CDY12909	Canola	cytosol	10.32	22.41
CDX83558	Canola	plastid	25.99	22.24
CDX83560	Canola	plastid	24.4	21.77
CDY13587	Canola	plastid	25.4	21.73
CDY13589	Canola	plastid	23.21	21.01
KRG93110	Soybean	mitochondrion	12.3	20.95
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	26.79	19.77
CDY68788	Canola	endoplasmic reticulum, golgi	16.07	19.29
VIT_18s0001g05430.t01	Wine grape	cytosol	17.46	18.26
CDY61957	Canola	plastid	13.1	17.46
CDY12910	Canola	plastid	3.97	13.42

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078JU12	UniProt:A0A078JU12	EnsemblPlants:CDY68962
ProteinID:CDY68962	ProteinID:CDY68962.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00081494001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF22	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EDC279	SEG:seg	:	:

Description

BnaA01g35040DBnaA01g35040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JU12]

Coordinates

chrLK038353:+:987..3676

Molecular Weight (calculated)

58537.7 Da

IEP (calculated)

6.471

GRAVY (calculated)

-0.249

Length

504 amino acids

Sequence
(BLAST)

001: MLMSSNHAEG HDSTKRKILL IYLMISLGIA YHFENEIEKI LTHAFEKIDD MVESEHDLYA ISIFFWVFRT YGYNMSADAF KRFKGDDGKF MDSLTKDAKG
101: MLSLYEAAHL RTTRDCIMDE ALSFATKHME SLAGRSSPHL SRLIQNALGL SQHWNMEILV AMEYISFYEQ EEDHDETLLK FSKLNFKLLQ LIYLKELKMV
201: TKWYKELDFA SKLPPYFRDR VVELHFFVIS MYFEPHFSSA RIMLTKFVTA ETIIDDTFDR YASMSEAESL AKSLERWAPD KDMDKQPNYL KFVFKFILNV
301: FKDFEREVGS EGRSYIVKST VEEFKILVKA NLDLAKWAQI AHVPSFEDYM VVGELEVSWY ASMAGTFMGM GHIAMKGAYE WLKSRPKLIQ AISINGRLMN
401: DMTGFEDDMS RGYVTNGINC YMKQYGVTKA EAYKELHKMR VHNDKIVNGE LLTTKDVPRR VLKQAINCAR MANVAYGYGE GLTHPEGKIK DYIVSLYLDW
501: KDVD

Best Arabidopsis Sequence Match ( AT1G66020.1 )
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEFK TVTKGNFDLA KWAHAVHVPS FEEYMEVGEE EISVCSTLAG IFMCMEQKAT KEDYEWLKSR PKFIQTLCAR CRLKNDITGF
501: EDDMSRGYVT NAVNCYMKQY GVTKQEAFGE LNKIIVEADK ILNEEFLTTV GVRHCVLKAT FDLARMIFIT YNGYEGFTYP QGKIKEYMTS LFVDRIGL

Arabidopsis Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.