CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95274	Canola	cytosol	22.51	98.5
CDX95273	Canola	plastid	67.7	94.03
Bra027931.1-P	Field mustard	plastid	94.33	91.35
CDY13053	Canola	extracellular	60.48	63.65
CDY23121	Canola	cytosol	40.03	61.32
CDY09325	Canola	plastid	25.6	55.19
CDY69236	Canola	cytosol	45.88	55.17
CDY18347	Canola	cytosol	15.12	53.01
CDY68962	Canola	cytosol	45.7	52.78
CDX98661	Canola	cytosol	49.83	52.06
CDY70719	Canola	cytosol	30.76	51.44
CDY42473	Canola	cytosol	49.31	51.07
CDY01639	Canola	cytosol	16.84	50.78
CDY54565	Canola	plastid	50.0	50.61
CDX76457	Canola	plastid	51.72	50.08
CDX98659	Canola	plastid	53.09	50.0
CDX76471	Canola	plastid	51.55	49.75
CDY09324	Canola	plastid	50.34	48.91
CDY49723	Canola	plastid	49.66	48.49
CDY14933	Canola	cytosol	37.63	44.88
CDX74453	Canola	cytosol	40.89	44.82
CDY63249	Canola	cytosol	41.07	42.99
CDY71184	Canola	cytosol	24.23	42.22
CDY06577	Canola	cytosol	21.65	38.41
CDX82478	Canola	cytosol	35.4	38.36
CDY67821	Canola	cytosol	12.54	37.63
CDX82475	Canola	plastid	36.94	37.01
CDX98470	Canola	plastid	36.77	36.64
PGSC0003DMT400050941	Potato	cytosol	15.64	36.4
CDX75776	Canola	plastid	36.43	36.12
CDY39124	Canola	cytoskeleton, cytosol, plastid	34.54	35.96
CDY27296	Canola	cytosol	12.03	35.9
CDY02143	Canola	plastid	33.85	35.62
CDY39119	Canola	plastid	36.77	35.55
CDX87217	Canola	plastid	36.08	34.94
CDX82477	Canola	plastid	17.53	34.0
PGSC0003DMT400070310	Potato	cytosol	17.87	33.44
CDY32356	Canola	plastid	35.05	32.9
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	21.31	32.55
VIT_18s0001g04200.t01	Wine grape	cytosol	6.53	31.93
PGSC0003DMT400079785	Potato	cytosol	16.84	31.51
PGSC0003DMT400047124	Potato	cytosol	16.67	31.19
Solyc01g101190.2.1	Tomato	cytosol	29.21	30.8
PGSC0003DMT400075074	Potato	cytosol	11.0	30.77
CDY15827	Canola	cytosol	7.9	29.68
Solyc01g101220.1.1	Tomato	cytosol	8.42	29.17
CDX75775	Canola	plastid	23.88	28.72
Os02t0458100-01	Rice	plastid	17.35	25.83
VIT_18s0001g04510.t01	Wine grape	plastid	13.57	25.82
CDY14934	Canola	cytosol	0.69	25.0
CDY62515	Canola	cytosol	17.01	24.69
CDY54750	Canola	cytosol	16.84	24.44
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	12.89	24.19
CDX90785	Canola	plastid	24.57	24.11
CDY66920	Canola	cytosol	13.57	23.87
CDX76827	Canola	plastid	22.51	23.43
CDY21487	Canola	plastid	23.88	23.36
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.97	23.11
CDX83208	Canola	plastid	23.37	22.86
CDY13587	Canola	plastid	23.02	22.75
CDY68676	Canola	cytosol	14.6	22.61
CDX83558	Canola	plastid	22.85	22.58
CDX83560	Canola	plastid	21.31	21.95
CDY53648	Canola	cytosol	9.45	21.48
CDY53129	Canola	cytosol	9.45	21.48
CDY12910	Canola	plastid	5.5	21.48
CDY13589	Canola	plastid	20.45	21.36
KRG93110	Soybean	mitochondrion	10.48	20.61
CDY12909	Canola	cytosol	8.08	20.26
GSMUA_Achr6P24340_001	Banana	cytosol	5.15	20.13
CDY68788	Canola	endoplasmic reticulum, golgi	14.43	20.0
GSMUA_Achr6P24330_001	Banana	cytosol	4.81	19.86
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	22.51	19.18
CDY61957	Canola	plastid	12.03	18.52
VIT_18s0001g05430.t01	Wine grape	cytosol	14.95	18.05

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078HV52	UniProt:A0A078HV52	EnsemblPlants:CDY41707
ProteinID:CDY41707	ProteinID:CDY41707.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00073415001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF25	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EE273B	SEG:seg	:	:

Description

BnaA09g15350DBnaA09g15350D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV52]

Coordinates

chrLK032504:-:66056..71886

Molecular Weight (calculated)

67019.6 Da

IEP (calculated)

6.884

GRAVY (calculated)

-0.312

Length

582 amino acids

Sequence
(BLAST)

001: MGAITVFGPK LGSKLSVHFH TNTFTSCRLS SFPSMSFPVK PPKLVPLKAT TNTLASKDEK NRKFKKLAPS EWGHRFVDAH VDVSEIDSLG REIEALKPKV
101: EDLFLSSGGV NSTKKNILFI YLLVSLGLAY HFKAEIEENL KEGLKMIEET SSGEDDLYTV SIIFWVFRTY GHNVSSDVFR RFKGDDGKFK EYLTKDAKGI
201: LSFFAMSCLE TLVASGTCQP HLSRRIQNAL GQPQHKNAEI LVAREYIRFY EQEEGSDKTL LKFSKLNFKF LQLQYLQELK DLSKWYKEKE FEYKLPPYYR
301: DRLVELHLVT LPFFETKYSR VRIMVTKLFV VQIILDDTCD RYASLREVES LVNAIERWDL DDAMDGQPDY LKFVIKHIFD TFQEFEREVA SELGGSYSLK
401: ATIDSCKRYA RANLQLATWA EADHVPSFEE YLEVAGVEVA VDFTIAGVLM AMKDICKKEA YEWLKSGDKL VIAMYTVTRV LNDIHGYEDD MSRGYVTNSI
501: NCYKKQYGVT EKEAFEKLHQ IIANANKMIN EELLKPTNMP RQILKEMLNY QRITNVSYEI GDEFTRPGGK LKSHVTSMYL DL

Best Arabidopsis Sequence Match ( AT1G48800.1 )
(BLAST)

001: MEAIRVFGPK LGSRLSIRSH TTAFPACKLS RFPLTSFPGK HAHLVLLKAT TIPLASGDKE NNRKFEKLGP SEWGNQFLFA HVDLSEMDAL EREIEALKPK
101: VRDMFMSFKG MKSNKKNLFL IYLLVSLGLA HHFEDEIEES VKGCSQEMVE MMDGENDLYT VSIIFWVFRT YGHNISSDIF NRFKGHNGKF KECLATDAKG
201: ILSLYEAAHM GTTTDYILDE ALSFTLSYLE SLAANGTCKP NLVRRIRNAL GLLQNKNVEI LVAKEYIRFY EQEEDCDKTI LEFSMLNLKF LQLHYLQELK
301: LLTKWYKEQD FESKLPPYYR DRIVELHLAT LAYINPKYSR VRIILTMIYT IQIILDDTCD RYASLREVES LAATIERWDH NDHAMEGLPD YLKSVAKFIF
401: HTFQEFEREV SSESGGSYSL KATIEDCKRM MRSNLQLAKW AVTGHLPSFD EYLDVAGVEI AVYFTVAGIL LGMENINKKE AYEWLIFRDK LVRAMSTKAR
501: LVNDLFGYKD DMRRGYVTNS INCYKKQYGV TEEEAFRKLH QMVADGDKMM NEEFLKPINV PHQVLKAVLD TLRAINICYD NEDGFTRLNG NLKNYITSMY
601: VDL

Arabidopsis Description

TPS28Terpenoid synthase 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9C748]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.