CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	64.63	96.81
Bra021082.1-P	Field mustard	cytosol	99.47	68.5
AT4G16740.1	Thale cress	mitochondrion	81.38	54.16
VIT_13s0067g00300.t01	Wine grape	cytosol	22.34	53.16
PGSC0003DMT400089009	Potato	cytosol	21.54	50.31
CDY15827	Canola	cytosol	19.95	48.39
PGSC0003DMT400055897	Potato	cytosol	12.77	39.67
CDY68788	Canola	endoplasmic reticulum, golgi	41.49	37.14
VIT_13s0067g03830.t01	Wine grape	plastid	43.35	37.05
CDX90785	Canola	plastid	55.59	35.24
CDY13587	Canola	plastid	53.72	34.3
CDX83558	Canola	plastid	53.72	34.3
VIT_00s0724g00010.t01	Wine grape	cytosol	38.3	33.72
CDX83208	Canola	plastid	52.66	33.28
CDX76827	Canola	plastid	49.47	33.27
CDY21487	Canola	plastid	52.13	32.94
CDY53648	Canola	cytosol	22.34	32.81
CDY53129	Canola	cytosol	22.34	32.81
VIT_13s0067g00130.t01	Wine grape	plastid	44.68	32.25
CDX83560	Canola	plastid	48.4	32.21
CDY54750	Canola	cytosol	34.31	32.17
CDY62515	Canola	cytosol	33.78	31.67
CDY13589	Canola	plastid	46.81	31.6
Solyc02g079840.1.1	Tomato	cytosol	44.41	31.04
VIT_13s0067g03700.t01	Wine grape	cytosol	46.01	30.57
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	54.52	30.01
VIT_13s0084g00010.t01	Wine grape	cytosol	43.88	29.95
VIT_00s2271g00010.t01	Wine grape	cytosol	30.85	29.37
VIT_13s0067g00370.t01	Wine grape	plastid	44.15	28.14
VIT_13s0067g03790.t01	Wine grape	plastid	43.88	27.82
VIT_13s0019g00060.t01	Wine grape	plastid	43.88	27.78
CDY18347	Canola	cytosol	12.23	27.71
VIT_13s0067g00090.t01	Wine grape	cytosol	24.47	26.29
VIT_13s0067g03770.t01	Wine grape	cytosol	24.2	26.22
CDY66920	Canola	cytosol	22.61	25.68
VIT_13s0067g03740.t01	Wine grape	cytosol	28.72	25.59
CDY14934	Canola	cytosol	1.06	25.0
CDY70719	Canola	cytosol	22.07	23.85
CDY27296	Canola	cytosol	11.97	23.08
CDY61957	Canola	plastid	23.14	23.02
CDY67821	Canola	cytosol	11.7	22.68
CDX95273	Canola	plastid	22.87	20.53
CDX82477	Canola	plastid	16.22	20.33
CDY12910	Canola	plastid	7.98	20.13
CDY09325	Canola	plastid	13.56	18.89
CDY14933	Canola	cytosol	24.47	18.85
CDX74453	Canola	cytosol	25.53	18.08
CDX87217	Canola	plastid	28.72	17.97
CDY68962	Canola	cytosol	23.94	17.86
CDY12909	Canola	cytosol	10.9	17.67
CDY63249	Canola	cytosol	25.53	17.27
CDY01639	Canola	cytosol	8.78	17.1
CDX75775	Canola	plastid	21.54	16.74
CDY69236	Canola	cytosol	21.54	16.74
CDX75776	Canola	plastid	25.8	16.52
CDY02143	Canola	plastid	24.2	16.46
CDX98661	Canola	cytosol	23.94	16.16
CDY39124	Canola	cytoskeleton, cytosol, plastid	23.94	16.1
CDY42473	Canola	cytosol	23.94	16.01
CDY39119	Canola	plastid	25.53	15.95
CDX98470	Canola	plastid	24.73	15.92
CDX82478	Canola	cytosol	22.61	15.83
CDX76457	Canola	plastid	25.27	15.81
CDY09324	Canola	plastid	24.73	15.53
CDY13053	Canola	extracellular	22.34	15.19
CDY54565	Canola	plastid	23.14	15.13
CDY32356	Canola	plastid	24.73	15.0
CDX82475	Canola	plastid	23.14	14.97
CDY49723	Canola	plastid	23.4	14.77
CDY41707	Canola	plastid	22.61	14.6
CDX98659	Canola	plastid	23.94	14.56
CDX76471	Canola	plastid	22.87	14.26
CDY71184	Canola	cytosol	12.5	14.07
CDY06577	Canola	cytosol	11.44	13.11
CDY23121	Canola	cytosol	10.64	10.53
KRH22502	Soybean	cytosol	4.52	9.71
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	9.84	9.71
VIT_13s0067g00320.t01	Wine grape	cytosol	0.8	2.54
GSMUA_Achr4P07690_001	Banana	cytosol	0.8	1.75
CDX95274	Canola	cytosol	0.27	0.75

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078JSR5	UniProt:A0A078JSR5	EnsemblPlants:CDY68676
ProteinID:CDY68676	ProteinID:CDY68676.1	ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00077050001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EDD1D3	SEG:seg	:	:	:

Description

BnaAnng28010DBnaAnng28010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JSR5]

Coordinates

chrLK037786:-:190..2897

Molecular Weight (calculated)

44886.5 Da

IEP (calculated)

9.294

GRAVY (calculated)

-0.395

Length

376 amino acids

Sequence
(BLAST)

001: MKTQSQPLEA RRSANYRPSL WKHENLLLLG NKYAKEDKIE RAKLLKQEVS RMLDETEGLL EQLELVDNLQ RLGISYHFER EIKKILTNVH VRHVRHRKRV
101: DRKRSEDLYA TALMFRLLRQ HGLNIAQDVF YCFFGDGLDD EDIKSVLSLY EASYLSTRFD TKLKETIYYT TTRLKKFVEM KNNETTSYVR KMVIRALEMP
201: YHRRVRRLEA RWYIDVYGER HDTNPNLLEL AKLDFNFVQV IHQDELKSLS SWWSKTGLTK ILDFVRDRIT ESYFSSVGVI YEPEFAHHRQ MLTKVFMLIT
301: TIDDIYDIYG TLEELQLFTA IVEKWDVNRL EELPKYMKLC FLCLINEINQ IGYIILRDKG FNAIPYLKKS VRILAV

Best Arabidopsis Sequence Match ( AT4G16740.2 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESVRI LIILSM

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.