Factsheet for Bra021082.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53648	Canola	cytosol	46.89	100.0
CDY53129	Canola	cytosol	46.89	100.0
CDY68676	Canola	cytosol	68.5	99.47
AT4G16740.1	Thale cress	mitochondrion	81.32	78.58
Bra025163.1-P	Field mustard	cytosol	55.86	54.46
VIT_13s0067g00300.t01	Wine grape	cytosol	15.38	53.16
Bra038504.1-P	Field mustard	plastid	51.83	52.7
PGSC0003DMT400089009	Potato	cytosol	15.02	50.93
VIT_13s0067g00090.t01	Wine grape	cytosol	31.87	49.71
Bra000727.1-P	Field mustard	plastid	46.34	49.71
VIT_13s0067g03770.t01	Wine grape	cytosol	31.32	49.28
Bra000568.1-P	Field mustard	plastid	52.75	48.4
VIT_00s2271g00010.t01	Wine grape	cytosol	33.88	46.84
VIT_00s0724g00010.t01	Wine grape	cytosol	36.26	46.37
VIT_13s0067g03700.t01	Wine grape	cytosol	46.52	44.88
VIT_13s0084g00010.t01	Wine grape	cytosol	44.69	44.28
VIT_13s0067g03740.t01	Wine grape	cytosol	34.07	44.08
VIT_13s0067g00320.t01	Wine grape	cytosol	9.52	44.07
Solyc02g079840.1.1	Tomato	cytosol	43.22	43.87
VIT_13s0067g00130.t01	Wine grape	plastid	40.11	42.03
VIT_13s0067g00370.t01	Wine grape	plastid	44.51	41.19
VIT_13s0067g03790.t01	Wine grape	plastid	43.77	40.3
VIT_13s0019g00060.t01	Wine grape	plastid	43.59	40.07
GSMUA_Achr4P07690_001	Banana	cytosol	12.45	39.77
PGSC0003DMT400055897	Potato	cytosol	8.79	39.67
VIT_13s0067g03830.t01	Wine grape	plastid	30.77	38.18
KRH22502	Soybean	cytosol	10.07	31.43
Bra025164.1-P	Field mustard	cytosol	55.86	28.72
Bra027609.1-P	Field mustard	cytosol	14.1	26.74
Bra021566.1-P	Field mustard	plastid	24.36	26.18
Bra012955.1-P	Field mustard	plastid	27.66	25.21
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	25.64	25.04
Bra035927.1-P	Field mustard	mitochondrion, plastid	25.64	24.65
Bra012515.1-P	Field mustard	extracellular	10.81	23.89
Bra002165.1-P	Field mustard	cytosol	24.18	23.74
Bra027079.1-P	Field mustard	plastid	14.29	23.42
Bra012513.1-P	Field mustard	cytosol	20.33	23.37
Bra021560.1-P	Field mustard	plastid	25.64	23.26
Bra039519.1-P	Field mustard	cytosol	23.44	22.98
Bra020921.1-P	Field mustard	cytosol	17.03	22.96
Bra028251.1-P	Field mustard	cytosol	23.26	22.8
Bra002968.1-P	Field mustard	plastid	16.12	22.8
Bra021564.1-P	Field mustard	plastid	25.09	22.72
Bra002714.1-P	Field mustard	plastid	23.63	21.9
Bra001557.1-P	Field mustard	plastid	23.81	21.52
Bra027931.1-P	Field mustard	plastid	23.44	21.3
Bra001555.1-P	Field mustard	plastid	22.71	20.39
Bra020953.1-P	Field mustard	plastid	22.34	20.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra021082	EnsemblPlants:Bra021082.1	EnsemblPlants:Bra021082.1-P
ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009605	GO:GO:0009607	GO:GO:0009611
GO:GO:0009625	GO:GO:0009719	GO:GO:0009753	GO:GO:0009987	GO:GO:0010333	GO:GO:0016106
GO:GO:0016829	GO:GO:0034768	GO:GO:0046872	GO:GO:0050551	GO:GO:0052578	GO:GO:0080027
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4DX36	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002546ED0	SEG:seg	:

Description

AT4G16740 (E=1e-247) ATTPS03 | ATTPS03; (E)-beta-ocimene synthase/ myrcene synthase

Coordinates

chrA08:+:9986041..9990241

Molecular Weight (calculated)

64270.6 Da

IEP (calculated)

8.342

GRAVY (calculated)

-0.400

Length

546 amino acids

Sequence
(BLAST)

001: MKTQSQPLEA RRSANYRPSL WKHENLLLLG NKYAKEDKIE RAKLLKQEVS RMLDETEGLL EQLELVDNLQ RLGISYHFER EIKKILTNVH VRHVRHRKRV
101: DRKRSEDLYA TALMFRLLRQ HGLNIAQDVF YCFFGDGLDD EDIKSVLSLY EASYLSTRFD TKLKETIYYT TTRLKKFVEM KNNETTSYVR KMVIRALEMP
201: YHRRVRRLEA RWYIDVYGER HDTNPNLLEL AKLDFNFVQV IHQDELKSLS SWWSKTGLTK ILDFVRDRIT ESYFSSVGVI YEPEFAHHRQ MLTKVFMLIT
301: TIDDIYDIYG TLEELQLFTA IVEKWDVNRL EELPKYMKLC FLCLINEINQ IGYIILRDKG FNAIPYLKKS WADMCTTFLK EAKWYKRGYK PKLEEYMENG
401: WLSSSVPTIL LHLLCLFPDQ NLDILVSYHH HVIRNSATIL RLANDLATSS KELARGDNVK SVQCHMHETG SPEAESRAYI REMIGVAWED LNLERKSCWL
501: HQGFVEAAAN LGRVAQCIYQ YGDGYGSPEK AKTVDHVRSL LVYPVP

Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.