Factsheet for Bra035927.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

cytosol 2
plastid 3
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87217	Canola	plastid	95.95	90.68
Bra012955.1-P	Field mustard	plastid	78.7	74.62
Bra021564.1-P	Field mustard	plastid	59.15	55.72
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	54.58	55.46
Bra021560.1-P	Field mustard	plastid	57.92	54.65
Bra001555.1-P	Field mustard	plastid	57.92	54.11
Bra021566.1-P	Field mustard	plastid	48.24	53.94
Bra001557.1-P	Field mustard	plastid	53.7	50.5
PGSC0003DMT400050941	Potato	cytosol	18.66	42.4
PGSC0003DMT400075074	Potato	cytosol	15.14	41.35
Bra027609.1-P	Field mustard	cytosol	20.95	41.32
VIT_18s0001g04200.t01	Wine grape	cytosol	8.63	41.18
Bra012515.1-P	Field mustard	extracellular	17.61	40.49
Bra012513.1-P	Field mustard	cytosol	30.11	36.0
Solyc01g101220.1.1	Tomato	cytosol	10.39	35.12
PGSC0003DMT400047124	Potato	cytosol	19.19	35.05
Bra002165.1-P	Field mustard	cytosol	33.8	34.53
PGSC0003DMT400079785	Potato	cytosol	18.66	34.08
PGSC0003DMT400070310	Potato	cytosol	18.49	33.76
Bra020921.1-P	Field mustard	cytosol	23.94	33.58
Bra027931.1-P	Field mustard	plastid	35.39	33.44
Bra028251.1-P	Field mustard	cytosol	32.75	33.39
Solyc01g101190.2.1	Tomato	cytosol	32.04	32.97
Bra002968.1-P	Field mustard	plastid	22.36	32.9
Bra039519.1-P	Field mustard	cytosol	32.04	32.67
Bra002714.1-P	Field mustard	plastid	33.63	32.43
Bra020953.1-P	Field mustard	plastid	33.63	31.31
Bra000727.1-P	Field mustard	plastid	26.41	29.47
VIT_18s0001g04510.t01	Wine grape	plastid	15.85	29.41
Os02t0458100-01	Rice	plastid	19.89	28.9
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.14	27.74
Bra025163.1-P	Field mustard	cytosol	25.7	26.07
Bra000568.1-P	Field mustard	plastid	27.29	26.05
Bra021082.1-P	Field mustard	cytosol	24.65	25.64
Bra038504.1-P	Field mustard	plastid	24.12	25.51
KRG93110	Soybean	mitochondrion	12.68	24.32
GSMUA_Achr6P24330_001	Banana	cytosol	5.46	21.99
GSMUA_Achr6P24340_001	Banana	cytosol	5.28	20.13
VIT_18s0001g05430.t01	Wine grape	cytosol	16.9	19.92
Bra027079.1-P	Field mustard	plastid	10.21	17.42
Bra025164.1-P	Field mustard	cytosol	27.46	14.69

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra035927	EnsemblPlants:Bra035927.1	EnsemblPlants:Bra035927.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M4F4C7
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002542020	:

Description

AT3G29410 (E=7e-147) | terpene synthase/cyclase family protein

Coordinates

chrA09:-:2876458..2879134

Molecular Weight (calculated)

66136.9 Da

IEP (calculated)

5.412

GRAVY (calculated)

-0.245

Length

568 amino acids

Sequence
(BLAST)

001: MRASRMMMSF DPKTLPCAHR VPLCHKAKLS LLPGRLLRNQ TLSRQPTKQD LFCVMATGGD LESIRPLAQF TPTFLGDHLF AVPVDGSEFN AIEHEIESVM
101: KPYVRNMLMS PHTCDKEKIR LIYLLISLAI SHYFEDEIEE ILSKAFGKLE GLISKEDDLE TISTMFEVFR LYGHKMSCDV FERFRGEHDG KFKESVVRDV
201: RGMLQLYQAS YLKTKDENII EEARSFTRTH LAAVTSTTQP HLSKHIQNAL YIPRYHCVEI AVAREYISFY EQEQDHEENL LKFAKLNFSY CQLHYVKELK
301: DVTTWWKELD LASKLPNTFR DRNVEIYFGM MGIYFEPRYS LARVIGTKIS MIMTVVDDTY DAYGTLPEVI SFTDALQRWD IETIEDLPNY MQIIFRTLWE
401: IMQDIEREMS SLGRPGGLQP TIDEVRAMDD MAIYSFLGME DCDEKIMYEW FASRPKVILA FNVVFRLIND ITTFEEELER GEGANGVNCY MKQHGVSQEE
501: AVIELKKIIK DHHEMMMDEF FKALSTVPRQ IVMRVFNTAR VINLFYKEGD GFGHPDENLK AHFTSLFL

Best Arabidopsis Sequence Match ( AT1G33750.1 )
(BLAST)

001: MEAARMGFRA KTLPHLGNGT RLPLKTKLSL FPMHLLQNHT TLSRRSTKLN LCVKACSKTS GVESSRPLPH SAPDLWGDHI LSVPTENSEF DTLETEIESI
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL

Arabidopsis Description

TPS22Terpenoid synthase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ27]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.