Factsheet for Bra012955.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02143	Canola	plastid	90.32	97.83
Bra035927.1-P	Field mustard	mitochondrion, plastid	74.62	78.7
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	54.92	58.86
Bra021566.1-P	Field mustard	plastid	49.58	58.46
Bra021560.1-P	Field mustard	plastid	58.1	57.81
Bra021564.1-P	Field mustard	plastid	58.1	57.71
Bra001555.1-P	Field mustard	plastid	58.1	57.24
Bra001557.1-P	Field mustard	plastid	54.09	53.64
VIT_18s0001g04200.t01	Wine grape	cytosol	8.35	42.02
PGSC0003DMT400075074	Potato	cytosol	14.52	41.83
PGSC0003DMT400050941	Potato	cytosol	17.03	40.8
Bra027609.1-P	Field mustard	cytosol	19.37	40.28
Bra012513.1-P	Field mustard	cytosol	31.39	39.58
Bra012515.1-P	Field mustard	extracellular	16.03	38.87
PGSC0003DMT400070310	Potato	cytosol	19.7	37.94
Bra020921.1-P	Field mustard	cytosol	24.71	36.54
Bra028251.1-P	Field mustard	cytosol	33.56	36.09
PGSC0003DMT400079785	Potato	cytosol	18.7	36.01
Bra002165.1-P	Field mustard	cytosol	33.06	35.61
Bra027931.1-P	Field mustard	plastid	35.73	35.61
Bra002968.1-P	Field mustard	plastid	22.87	35.49
Solyc01g101220.1.1	Tomato	cytosol	9.68	34.52
PGSC0003DMT400047124	Potato	cytosol	17.86	34.41
Bra002714.1-P	Field mustard	plastid	33.72	34.3
Bra039519.1-P	Field mustard	cytosol	31.72	34.11
Solyc01g101190.2.1	Tomato	cytosol	31.39	34.06
Bra020953.1-P	Field mustard	plastid	34.56	33.93
VIT_18s0001g04510.t01	Wine grape	plastid	15.03	29.41
Bra000727.1-P	Field mustard	plastid	24.54	28.88
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.36	27.74
Bra021082.1-P	Field mustard	cytosol	25.21	27.66
Bra025163.1-P	Field mustard	cytosol	25.54	27.32
Os02t0458100-01	Rice	plastid	17.03	26.09
Bra038504.1-P	Field mustard	plastid	23.37	26.07
Bra000568.1-P	Field mustard	plastid	25.88	26.05
KRG93110	Soybean	mitochondrion	11.52	23.31
GSMUA_Achr6P24330_001	Banana	cytosol	5.34	22.7
GSMUA_Achr6P24340_001	Banana	cytosol	5.34	21.48
VIT_18s0001g05430.t01	Wine grape	cytosol	16.03	19.92
Bra027079.1-P	Field mustard	plastid	10.85	19.52
Bra025164.1-P	Field mustard	cytosol	27.38	15.44

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra012955	EnsemblPlants:Bra012955.1	EnsemblPlants:Bra012955.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4D8Z5	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002540578	SEG:seg	:	:	:	:

Description

AT3G29410 (E=7e-189) | terpene synthase/cyclase family protein

Coordinates

chrA03:-:21343809..21346255

Molecular Weight (calculated)

69861.5 Da

IEP (calculated)

5.950

GRAVY (calculated)

-0.256

Length

599 amino acids

Sequence
(BLAST)

001: MQTSSMSMSF GPKIIPRTHK VTLYHKTKLS LLPRPLLQNQ TLPRKPTKQD SFYVMATSND LENTRPLAQF TPTFLGDHHF SVPVNDSEID EIEHEIESVM
101: KPCVRDMLMS FHTCTKDKIR LIHLLISLAI SHYFENEIEE ILNKTFGELE ILTDNEDDLE TISIMFEVFR LYGHKMPCVV FERFKGEHDG KFKESVVGDV
201: RGMLQLYQAS YLKTKDEDIM EEARSFTRTH LAVTTTHPHL SKLIEHVLYI PRYRCIEIAV AREYISFYKE EEYHDEKLLK FAKLNFSYCQ LHYIKELKAL
301: TKWWKEIDLA SKLPYTFRDR IAEYGLGMVG IYLEPRYSLA RVICTKISMI MTVVDDTYDA YGTLPEVTSF TDALQRWDIG AIEDLPSYMQ IIFRNLWEII
401: QDIEREMSSL GRHGGVQPTI NEIKSLMKEG YIKIAKWART GHVPSFEEYM EVGVVTAAMD DMTLYIFLGM EDCDEKIMYE WVASKPKFIH AFNVVLRLTN
501: DIATFEEELK RGEVANGVNC YMKQHSVTQE EAVTELKKMI KDHHEIMMEE FFKASSTVPR QILVRVFNLA RVIYLFYKEG DGFGHPGENL KDQFTSLFT

Best Arabidopsis Sequence Match ( AT1G33750.1 )
(BLAST)

001: MEAARMGFRA KTLPHLGNGT RLPLKTKLSL FPMHLLQNHT TLSRRSTKLN LCVKACSKTS GVESSRPLPH SAPDLWGDHI LSVPTENSEF DTLETEIESI
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL

Arabidopsis Description

TPS22Terpenoid synthase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ27]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.