Factsheet for Bra000568.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83208	Canola	plastid	99.66	99.66
Bra000727.1-P	Field mustard	plastid	68.74	80.35
AT2G24210.1	Thale cress	plastid	73.61	74.11
Bra025163.1-P	Field mustard	cytosol	59.5	63.21
Bra021082.1-P	Field mustard	cytosol	48.4	52.75
VIT_13s0067g00300.t01	Wine grape	cytosol	13.95	52.53
VIT_13s0067g03770.t01	Wine grape	cytosol	28.74	49.28
Bra038504.1-P	Field mustard	plastid	43.87	48.6
VIT_13s0067g00090.t01	Wine grape	cytosol	27.9	47.43
PGSC0003DMT400089009	Potato	cytosol	12.44	45.96
VIT_00s2271g00010.t01	Wine grape	cytosol	30.42	45.82
VIT_00s0724g00010.t01	Wine grape	cytosol	32.77	45.67
PGSC0003DMT400055897	Potato	cytosol	9.08	44.63
VIT_13s0067g00320.t01	Wine grape	cytosol	8.74	44.07
VIT_13s0084g00010.t01	Wine grape	cytosol	40.34	43.56
VIT_13s0067g03700.t01	Wine grape	cytosol	41.18	43.29
GSMUA_Achr4P07690_001	Banana	cytosol	12.27	42.69
VIT_13s0067g03740.t01	Wine grape	cytosol	30.25	42.65
Solyc02g079840.1.1	Tomato	cytosol	38.49	42.57
VIT_13s0067g00130.t01	Wine grape	plastid	35.97	41.07
VIT_13s0067g03790.t01	Wine grape	plastid	39.83	39.97
VIT_13s0019g00060.t01	Wine grape	plastid	39.33	39.39
VIT_13s0067g00370.t01	Wine grape	plastid	38.99	39.32
VIT_13s0067g03830.t01	Wine grape	plastid	27.56	37.27
Bra025164.1-P	Field mustard	cytosol	60.34	33.8
Bra027609.1-P	Field mustard	cytosol	13.95	28.82
KRH22502	Soybean	cytosol	8.24	28.0
Bra035927.1-P	Field mustard	mitochondrion, plastid	26.05	27.29
Bra021566.1-P	Field mustard	plastid	22.52	26.38
Bra012515.1-P	Field mustard	extracellular	10.92	26.32
Bra012955.1-P	Field mustard	plastid	26.05	25.88
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	24.03	25.58
Bra012513.1-P	Field mustard	cytosol	20.34	25.47
Bra001557.1-P	Field mustard	plastid	25.21	24.83
Bra021564.1-P	Field mustard	plastid	25.04	24.71
Bra002165.1-P	Field mustard	cytosol	22.86	24.46
Bra021560.1-P	Field mustard	plastid	24.71	24.42
Bra002968.1-P	Field mustard	plastid	15.8	24.35
Bra020921.1-P	Field mustard	cytosol	16.47	24.2
Bra002714.1-P	Field mustard	plastid	23.87	24.11
Bra027931.1-P	Field mustard	plastid	24.03	23.79
Bra039519.1-P	Field mustard	cytosol	22.02	23.52
Bra028251.1-P	Field mustard	cytosol	22.02	23.52
Bra027079.1-P	Field mustard	plastid	12.77	22.82
Bra001555.1-P	Field mustard	plastid	23.03	22.53
Bra020953.1-P	Field mustard	plastid	23.03	22.46

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EnsemblPlantsGene:Bra000568	EnsemblPlants:Bra000568.1	EnsemblPlants:Bra000568.1-P
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M4C8P0	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002540126	:	:	:	:	:

Description

AT2G24210 (E=4e-256) TPS10 | TPS10 (terpene synthase 10); (E)-beta-ocimene synthase/ myrcene synthase

Coordinates

chrA03:-:11816484..11825369

Molecular Weight (calculated)

69295.8 Da

IEP (calculated)

6.071

GRAVY (calculated)

-0.317

Length

595 amino acids

Sequence
(BLAST)

001: MASLVQMGSP LIYSNALVKT TQRPQPFTCT IVAKTTPGSE SPSVPRRSAN YRPSLWDHHH LLSVKNKYTN VKSVRERDLL KETVRKMLDH ERSTHLDQLE
101: LIDDLQKLGV SYHFEQEIDN MLTFTYHKLD KSNFMEYDME YDLHANALKF RLLRQHGFNV SEDVFDVFHE NCGKFESGEI NGFISLYEAS YLSTKSDTKL
201: QNYIRFFATQ QLRDFVDTHS NKNCASFGVG EMVAQALDMP YHWRMRRLAT RSYINLYGMK PDKNPVLVEL AKLDFNIVQA VYQEELKYVS SWWRETGLAN
301: QLHFSRDRIV ENYFWTIGQI QEPQFGYVRR IMAKLYTLLT TIDDIYDIYG TLEELQLFTA AFANWDVNRL DELPEYMRLC FLVVYNEVNI IGCDILRNKN
401: INVIPFLRKS WADASNAFLV EAIWYKRGYK PNTEEYMQNA WKSIGVPTIC LHFYCVFSDQ LSVQVLETLS EHLQNVVRCS AFVVRLANDL VTSQEELERG
501: DVLKSIQCYM NETGASQEKA CVHVRQIIND MWDEMNYEKM KSGSSLIPQD FVESVMNLAR MSQCMYQYGD GHSSPEKAKI VDSVMSILFN PIILD

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.