Factsheet for VIT_13s0067g03790.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0019g00060.t01	Wine grape	plastid	96.96	96.8
VIT_13s0067g03830.t01	Wine grape	plastid	69.14	93.18
VIT_13s0067g03740.t01	Wine grape	cytosol	60.54	85.07
VIT_13s0067g03770.t01	Wine grape	cytosol	44.69	76.37
VIT_13s0067g00300.t01	Wine grape	cytosol	19.9	74.68
VIT_13s0067g00090.t01	Wine grape	cytosol	42.16	71.43
VIT_13s0067g03700.t01	Wine grape	cytosol	66.78	69.96
VIT_00s0724g00010.t01	Wine grape	cytosol	50.25	69.79
VIT_13s0084g00010.t01	Wine grape	cytosol	64.59	69.51
VIT_13s0067g00130.t01	Wine grape	plastid	59.02	67.18
VIT_00s2271g00010.t01	Wine grape	cytosol	44.69	67.09
VIT_13s0067g00370.t01	Wine grape	plastid	64.76	65.08
VIT_13s0067g00320.t01	Wine grape	cytosol	12.14	61.02
PGSC0003DMT400089009	Potato	cytosol	15.51	57.14
PGSC0003DMT400055897	Potato	cytosol	11.47	56.2
CDY66920	Canola	cytosol	27.15	48.64
VIT_12s0134g00040.t01	Wine grape	mitochondrion	18.21	48.21
GSMUA_Achr4P07690_001	Banana	cytosol	13.83	47.95
VIT_00s0392g00030.t01	Wine grape	cytosol	25.63	47.95
Solyc01g105960.2.1	Tomato	cytosol	28.33	47.46
CDY53648	Canola	cytosol	20.4	47.27
CDY53129	Canola	cytosol	20.4	47.27
VIT_12s0134g00020.t01	Wine grape	plastid	46.88	46.26
VIT_12s0134g00030.t01	Wine grape	mitochondrion	44.69	45.77
Bra025163.1-P	Field mustard	cytosol	42.66	45.18
AT4G16740.1	Thale cress	mitochondrion	42.5	44.6
VIT_00s0361g00060.t01	Wine grape	cytosol	42.5	44.52
CDY68676	Canola	cytosol	27.82	43.88
Bra021082.1-P	Field mustard	cytosol	40.3	43.77
CDX76827	Canola	plastid	40.98	43.47
VIT_00s0372g00060.t01	Wine grape	cytosol	13.66	43.32
CDY13587	Canola	plastid	43.0	43.29
CDX83558	Canola	plastid	43.0	43.29
VIT_12s0059g02710.t01	Wine grape	plastid	37.77	43.16
CDX90785	Canola	plastid	43.0	43.0
AT3G25830.1	Thale cress	plastid	43.51	43.0
AT3G25820.1	Thale cress	plastid	43.51	43.0
AT3G25810.1	Thale cress	plastid	43.34	42.98
Bra000727.1-P	Field mustard	plastid	36.26	42.24
VIT_00s0392g00060.t01	Wine grape	cytosol	29.51	41.77
CDY62515	Canola	cytosol	28.16	41.65
CDX83560	Canola	plastid	39.63	41.59
VIT_12s0134g00140.t01	Wine grape	cytosol	20.4	41.44
CDY54750	Canola	cytosol	27.99	41.4
AT2G24210.1	Thale cress	plastid	41.15	41.29
AT4G16730.1	Thale cress	cytosol	37.44	41.19
VIT_12s0134g00090.t01	Wine grape	cytosol	20.4	41.16
VIT_12s0059g02720.t01	Wine grape	plastid	26.81	40.98
VIT_08s0007g06860.t01	Wine grape	plastid	19.56	40.42
Bra038504.1-P	Field mustard	plastid	36.59	40.41
CDY13589	Canola	plastid	37.94	40.4
VIT_00s0271g00030.t01	Wine grape	cytosol	32.72	40.25
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	17.03	40.24
Bra000568.1-P	Field mustard	plastid	39.97	39.83
CDX83208	Canola	plastid	39.97	39.83
CDY21487	Canola	plastid	39.97	39.83
VIT_18s0001g04200.t01	Wine grape	cytosol	7.76	38.66
VIT_00s0271g00010.t01	Wine grape	cytosol	31.7	38.21
VIT_00s0847g00020.t01	Wine grape	cytosol	26.48	38.2
VIT_00s0266g00020.t01	Wine grape	cytosol	31.03	37.78
VIT_00s0572g00010.t01	Wine grape	cytosol	28.5	37.56
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	43.17	37.48
VIT_00s0266g00010.t01	Wine grape	cytosol	31.87	37.28
VIT_00s0372g00040.t01	Wine grape	cytosol	31.7	37.08
VIT_00s0372g00020.t01	Wine grape	cytosol	25.3	36.95
VIT_00s0572g00020.t01	Wine grape	cytosol	31.37	36.69
VIT_00s0385g00020.t01	Wine grape	cytosol	30.52	35.63
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	29.34	35.51
VIT_00s0266g00070.t01	Wine grape	cytosol	30.86	35.4
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	34.4	35.36
KRH22502	Soybean	cytosol	9.78	33.14
CDY68788	Canola	endoplasmic reticulum, golgi	23.1	32.62
VIT_18s0001g04510.t01	Wine grape	plastid	16.19	31.37
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	32.55	29.92
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.67	28.06
CDY12909	Canola	cytosol	10.96	28.02
Bra027079.1-P	Field mustard	plastid	14.67	26.13
CDY61957	Canola	plastid	16.36	25.66
CDY12910	Canola	plastid	6.07	24.16
Bra025164.1-P	Field mustard	cytosol	43.17	24.11
VIT_18s0001g05430.t01	Wine grape	cytosol	17.54	21.58

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100248079	wikigene:100248079	EntrezGene:100249802	wikigene:100249802
MapMan:9.1.4.2	ProteinID:ADR74201	ProteinID:ADR74201.1	ProteinID:ADR74202	ProteinID:ADR74202.1	ProteinID:ADR74203
ProteinID:ADR74203.1	EMBL:AM437118	EMBL:AM439111	ProteinID:CAN64943	ProteinID:CAN64943.1	ProteinID:CAN82665
ProteinID:CAN82665.1	ProteinID:CCB62296	ProteinID:CCB62296.1	UniProt:F6I5S8	EMBL:FN596752	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	GO:GO:0046872	EMBL:HM807382	EMBL:HM807383	EMBL:HM807384	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EntrezGene:LOC100248079	wikigene:LOC100248079	EntrezGene:LOC100249802	wikigene:LOC100249802
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00015CBF68
ArrayExpress:VIT_13s0067g03790	EnsemblPlantsGene:VIT_13s0067g03790	EnsemblPlants:VIT_13s0067g03790.t01	RefSeq:XP_002267159	RefSeq:XP_002267159.1	:

Description

No Description!

Coordinates

chr13_random:+:2121769..2124257

Molecular Weight (calculated)

69401.0 Da

IEP (calculated)

5.408

GRAVY (calculated)

-0.326

Length

593 amino acids

Sequence
(BLAST)

001: MALLTLSSNP FFTFTRLQPA SRFCRGKSQG VCISGPVQCT GGAKTSSQTA VIVRRTASYQ PSIWDHDYIR SLTSDYVGET YTRQLEKLKG DVKMMLGQVG
101: EPLHQLELID TLQRLGIHYH FGEEIKRILH SIYNNYNRND TWKNGDLYAT ALEFRLLRQH GYHVPQDVFH IFINKMGTVN PWLNEDIKGI LCLYEASYLS
201: VKGENILEEA RDFTRNFLEE YLERTVDQND LTAIINHAME LPLHWRMLRL EARWFIDIYE RSQGMNPILL ELAKLDYNMV QATYQEDLKH ASMWWRSTRL
301: PEKSSFSRDR LVENFLWAVG FIFEPQFGYC RRMLTKLISL ITTIDDVYDV YGTLDELELF TDAVDRWDTN AMEQLPQYMK ICFLALYNFT NETAYDVLKE
401: HDLNIISYLR KAWADLSKSY LVEAKWYHEG YMPSLQEYIN NAMISISGPL TLVHAYFFIT NPMTEEALGC LERFRDIIRW SSTIFRLSDD LGTSSDELKR
501: GDVPKSIQCY MYETSASEDD ARKYIGFLID ETWKKMNEER NLNSPFSQTF IGMAMDIPRM AQCIYLYRDG YGVQDRETKD HVKTLFIEPI SLI

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.