Factsheet for VIT_00s0266g00070.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0271g00010.t01	Wine grape	cytosol	91.3	95.94
VIT_00s0266g00020.t01	Wine grape	cytosol	89.75	95.28
VIT_00s0372g00020.t01	Wine grape	cytosol	73.69	93.84
VIT_00s0372g00060.t01	Wine grape	cytosol	31.33	86.63
VIT_00s0385g00020.t01	Wine grape	cytosol	76.79	78.15
VIT_00s0271g00030.t01	Wine grape	cytosol	72.73	78.01
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	72.34	76.33
VIT_00s0572g00010.t01	Wine grape	cytosol	62.86	72.22
VIT_00s0266g00010.t01	Wine grape	cytosol	66.34	67.65
VIT_00s0372g00040.t01	Wine grape	cytosol	66.15	67.46
VIT_00s0572g00020.t01	Wine grape	cytosol	65.76	67.06
VIT_00s0847g00020.t01	Wine grape	cytosol	52.8	66.42
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	73.5	65.86
PGSC0003DMT400029275	Potato	cytosol	29.21	55.72
Solyc10g005420.1.1	Tomato	cytosol	8.7	54.88
PGSC0003DMT400029354	Potato	cytosol	29.79	53.85
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	65.96	52.87
PGSC0003DMT400029266	Potato	cytosol	41.01	50.84
PGSC0003DMT400029265	Potato	cytosol	49.13	49.51
KRH41974	Soybean	cytosol	27.85	49.48
KRH49914	Soybean	plastid	54.35	49.04
KRH21637	Soybean	cytosol	48.94	47.38
Solyc05g026590.1.1	Tomato	cytosol	25.53	45.99
GSMUA_Achr2P03420_001	Banana	cytosol	42.55	45.64
KRH49915	Soybean	plastid	50.68	44.56
Zm00001d053918_P001	Maize	cytosol	24.37	44.06
AT1G61680.1	Thale cress	plastid	47.97	43.59
GSMUA_Achr9P21010_001	Banana	cytosol	40.23	43.42
Solyc10g005390.2.1	Tomato	cytosol	47.2	43.34
EES04391	Sorghum	cytosol	34.24	42.45
Zm00001d053916_P002	Maize	cytosol	35.01	40.67
TraesCS6A01G067300.1	Wheat	cytosol	36.94	40.64
VIT_13s0067g00300.t01	Wine grape	cytosol	12.38	40.51
HORVU6Hr1G012090.1	Barley	cytosol	29.59	40.37
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	38.88	39.49
TraesCS2A01G478100.1	Wheat	cytosol	25.73	38.66
TraesCS6B01G091000.1	Wheat	cytosol	31.72	38.41
TraesCS7A01G261500.1	Wheat	cytosol	12.57	38.24
VIT_00s0724g00010.t01	Wine grape	cytosol	31.53	38.17
KXG29327	Sorghum	plastid	40.43	38.0
TraesCS6B01G091200.1	Wheat	cytosol	12.38	37.65
VIT_12s0134g00140.t01	Wine grape	cytosol	20.89	36.99
VIT_00s2271g00010.t01	Wine grape	cytosol	28.24	36.96
VIT_12s0134g00090.t01	Wine grape	cytosol	20.89	36.73
VIT_13s0067g00090.t01	Wine grape	cytosol	24.76	36.57
TraesCS6A01G067500.1	Wheat	plastid	35.98	36.47
VIT_18s0001g04200.t01	Wine grape	cytosol	8.32	36.13
VIT_13s0067g03770.t01	Wine grape	cytosol	24.18	36.02
Solyc10g005410.2.1	Tomato	plastid	43.71	35.93
TraesCS6B01G092000.1	Wheat	plastid	37.72	35.91
HORVU6Hr1G012270.1	Barley	plastid	37.72	35.85
EES04392	Sorghum	plastid	38.3	35.8
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	37.72	35.78
TraesCS6D01G048600.1	Wheat	plastid	37.72	35.78
TraesCS6D01G065200.1	Wheat	plastid	37.52	35.6
TraesCS6A01G067800.1	Wheat	plastid	37.72	35.52
TraesCS6B01G091500.1	Wheat	plastid	37.72	35.39
TraesCS2B01G501400.1	Wheat	plastid	37.52	35.27
TraesCS6B01G092800.1	Wheat	plastid	37.33	35.15
EES04390	Sorghum	plastid	38.3	35.11
VIT_00s0392g00030.t01	Wine grape	cytosol	21.47	35.02
TraesCS6D01G065100.1	Wheat	plastid	37.14	34.91
HORVU6Hr1G012170.1	Barley	plastid	36.75	34.61
TraesCSU01G116700.1	Wheat	plastid	36.75	34.55
Zm00001d015053_P001	Maize	plastid	38.68	34.42
TraesCS6B01G090500.1	Wheat	plastid	37.14	34.41
VIT_12s0134g00040.t01	Wine grape	mitochondrion	14.89	34.38
TraesCS6B01G091700.1	Wheat	plastid	36.36	34.37
TraesCSU01G116600.1	Wheat	plastid	36.56	34.36
Os10t0489500-00	Rice	cytosol	33.85	34.25
TraesCS6A01G067700.1	Wheat	plastid	36.36	34.18
TraesCS6B01G091100.1	Wheat	plastid	36.36	34.18
TraesCS2D01G477300.1	Wheat	plastid	37.33	34.16
TraesCS6A01G067600.1	Wheat	plastid	36.17	34.0
TraesCS6B01G091300.1	Wheat	plastid	36.17	34.0
TraesCS6B01G091400.1	Wheat	plastid	36.94	33.99
Zm00001d015054_P001	Maize	plastid	37.72	33.97
EES04394	Sorghum	endoplasmic reticulum	39.07	33.95
TraesCS6B01G090800.1	Wheat	plastid	35.78	33.7
TraesCSU01G116900.1	Wheat	plastid	36.56	33.69
VIT_13s0067g03740.t01	Wine grape	cytosol	27.47	33.65
VIT_13s0084g00010.t01	Wine grape	cytosol	35.59	33.39
HORVU6Hr1G012110.1	Barley	plastid	38.68	33.17
Os02t0121700-01	Rice	plastid	38.1	33.11
TraesCS7D01G540300.1	Wheat	cytosol, plastid	34.82	33.09
VIT_13s0067g00320.t01	Wine grape	cytosol	7.54	33.05
VIT_13s0067g03700.t01	Wine grape	cytosol	35.78	32.69
VIT_13s0067g00370.t01	Wine grape	plastid	35.98	31.53
VIT_13s0019g00060.t01	Wine grape	plastid	35.59	30.98
VIT_13s0067g03790.t01	Wine grape	plastid	35.4	30.86
VIT_13s0067g00130.t01	Wine grape	plastid	30.95	30.71
VIT_13s0067g03830.t01	Wine grape	plastid	25.92	30.45
VIT_12s0134g00030.t01	Wine grape	mitochondrion	33.66	30.05
VIT_00s0361g00060.t01	Wine grape	cytosol	32.88	30.04
VIT_12s0059g02720.t01	Wine grape	plastid	21.66	28.87
VIT_12s0134g00020.t01	Wine grape	plastid	33.27	28.62
VIT_00s0392g00060.t01	Wine grape	cytosol	22.82	28.16
VIT_12s0059g02710.t01	Wine grape	plastid	28.24	28.13
VIT_08s0007g06860.t01	Wine grape	plastid	13.93	25.09
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.89	24.84
VIT_18s0001g04510.t01	Wine grape	plastid	13.54	22.88
VIT_18s0001g05430.t01	Wine grape	cytosol	17.21	18.46

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ProteinID:CCB62828	ProteinID:CCB62828.1	UniProt:F6I7B0
EMBL:FN596772	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF40	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002108EF1	ArrayExpress:VIT_00s0266g00070	EnsemblPlantsGene:VIT_00s0266g00070	EnsemblPlants:VIT_00s0266g00070.t01	SEG:seg	:

Description

No Description!

Coordinates

chrUn:+:19404448..19406564

Molecular Weight (calculated)

59723.8 Da

IEP (calculated)

6.043

GRAVY (calculated)

-0.341

Length

517 amino acids

Sequence
(BLAST)

001: MESMMMIDAI QRLGIDHHFE EEIEAVLQKQ YMKSSIHGDC DEDLYEVALR FRLLRQEGYT VPADVLNNFK NKEGKFKQNL REDIRGLMGL YEASQLSIGE
101: DILEEAGNFS SLLLNACLQH LDRHQAAVVK NTLEHPHHKS WARFMTKNFL TDFQGTNGWI NALQELAKID FNMVKSVHQK EMLQISKWWK DLGLTEELKF
201: ARDQPLKWYM WPMAIIPDPR LSEQRIELTK PISLIYIIDD IFDVGGTLDE LTLFTEAVNR WDLSAFKELP EYMKMCFKTL DDITNEISTK VHKEHKWNPV
301: GSLRKAVIFK TFLYGFQWDY KCSTLNRSPI AAVGEFMQRI SSRGKMVCFW AKAEEYLKNG AVSSGVHVVL VHLFFLLGHG ITKENVDLVD DFPGIISSTA
401: TILRLWDDLG SAKDENQDGH DGSYVECYLK EHRGSSVENA RQIVAHMISD MWKRLNKECL SPNPFSTSFT KGSLNIARMV PLMYSYDDQQ CLPGLEEHMK
501: SLLLENLPYR NAQKINE

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.