Factsheet for TraesCSU01G116700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G116600.1	Wheat	plastid	96.36	96.36
TraesCS6B01G091100.1	Wheat	plastid	95.27	95.27
TraesCS6B01G091300.1	Wheat	plastid	95.09	95.09
HORVU6Hr1G012090.1	Barley	cytosol	61.09	88.65
TraesCSU01G116900.1	Wheat	plastid	75.09	73.62
EES04391	Sorghum	cytosol	49.27	64.99
KXG29327	Sorghum	plastid	62.91	62.91
Os10t0489500-00	Rice	cytosol	58.0	62.43
Zm00001d053918_P001	Maize	cytosol	32.18	61.89
Zm00001d053916_P002	Maize	cytosol	50.0	61.8
EES04392	Sorghum	plastid	60.73	60.4
Os02t0121700-01	Rice	plastid	63.82	58.99
EES04390	Sorghum	plastid	60.18	58.69
EES04394	Sorghum	endoplasmic reticulum	61.64	56.97
Zm00001d015053_P001	Maize	plastid	59.64	56.45
Zm00001d015054_P001	Maize	plastid	57.27	54.88
GSMUA_Achr2P03420_001	Banana	cytosol	39.09	44.61
GSMUA_Achr9P21010_001	Banana	cytosol	38.36	44.05
Solyc10g005420.1.1	Tomato	cytosol	6.55	43.9
VIT_00s0372g00060.t01	Wine grape	cytosol	14.91	43.85
VIT_00s0271g00030.t01	Wine grape	cytosol	36.91	42.12
PGSC0003DMT400029275	Potato	cytosol	20.73	42.07
PGSC0003DMT400029354	Potato	cytosol	21.45	41.26
VIT_00s0572g00010.t01	Wine grape	cytosol	33.45	40.89
VIT_00s0266g00020.t01	Wine grape	cytosol	35.82	40.45
VIT_00s0372g00020.t01	Wine grape	cytosol	29.82	40.39
VIT_00s0271g00010.t01	Wine grape	cytosol	35.82	40.04
PGSC0003DMT400029266	Potato	cytosol	30.0	39.57
VIT_00s0372g00040.t01	Wine grape	cytosol	36.0	39.05
VIT_00s0847g00020.t01	Wine grape	cytosol	29.09	38.93
VIT_00s0572g00020.t01	Wine grape	cytosol	35.82	38.86
VIT_00s0266g00010.t01	Wine grape	cytosol	35.82	38.86
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.73	36.92
PGSC0003DMT400029265	Potato	cytosol	34.36	36.84
VIT_00s0266g00070.t01	Wine grape	cytosol	34.55	36.75
VIT_00s0385g00020.t01	Wine grape	cytosol	32.73	35.43
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.09	34.9
KRH21637	Soybean	cytosol	33.45	34.46
Solyc10g005390.2.1	Tomato	cytosol	34.55	33.75
KRH49914	Soybean	plastid	35.09	33.68
Solyc05g026590.1.1	Tomato	cytosol	17.09	32.75
KRH49915	Soybean	plastid	33.27	31.12
KRH41974	Soybean	cytosol	16.36	30.93
AT1G61680.1	Thale cress	plastid	31.82	30.76
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.0	30.7
Solyc10g005410.2.1	Tomato	plastid	34.73	30.37
TraesCSU01G238200.1	Wheat	plastid	17.82	24.94

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	SignalP:SignalP-noTM	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCSU01G116700	EnsemblPlants:TraesCSU01G116700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chrUn:+:100619685..100623124

Molecular Weight (calculated)

63264.8 Da

IEP (calculated)

6.090

GRAVY (calculated)

-0.292

Length

550 amino acids

Sequence
(BLAST)

001: MAAAHVCFSL SSFAPLLHSA LPVARNGGQS GRNHGLFRPS PVIHPGREPV SHELSDDFDF QESLLNVQAL LHQHPKSNKG MLSMVDHLKR LCIDHYFQDE
101: IDNIIDSSVD LLHSDDLLDA TLSFRLMREV GYYVSADDVL QKFTNDNGDF NLRHSKDLRG LLSLHDMSHL NMGEASLYKA NEFSSKHLKF ALKYLEPNLA
201: RYVMKSIDHP YHVSLRQYKA RHHLSYLQNL PTRHTAIEKL ALAEFQMKKL QHQSEMQEIK RWWVDLGLSQ EIPAARDQVL KWYMWSMTIL EGFSFSRYRV
301: EATKVISMVY IVDDIFDLVA TQEELCLFNE AIKMWDLAAA ESLPSYMISC YKALYTITND IADMVRKEHG LNPINHLKQA WATLFDGFMI EGKWLSTNQV
401: PTSKDYLRNG VITSGAPLLF MHLLFMLGHD LTEDNNDHIL RVISCPAKIM RLWDDMGSAK DELQEGLDGS YKDLYQRENP HADAEKHMLD MIAGEWEDLN
501: RECFSQTKST LPPSFIGASL NFARMVSIMY GYDDEQKLPA LEDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.