Factsheet for VIT_00s0271g00010.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0266g00020.t01	Wine grape	cytosol	97.56	98.56
VIT_00s0372g00020.t01	Wine grape	cytosol	80.08	97.04
VIT_00s0372g00060.t01	Wine grape	cytosol	35.77	94.12
VIT_00s0266g00070.t01	Wine grape	cytosol	95.94	91.3
VIT_00s0385g00020.t01	Wine grape	cytosol	83.33	80.71
VIT_00s0271g00030.t01	Wine grape	cytosol	78.66	80.29
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	78.66	78.98
VIT_00s0572g00010.t01	Wine grape	cytosol	68.7	75.11
VIT_00s0266g00010.t01	Wine grape	cytosol	72.15	70.02
VIT_00s0372g00040.t01	Wine grape	cytosol	72.15	70.02
VIT_00s0572g00020.t01	Wine grape	cytosol	71.54	69.43
VIT_00s0847g00020.t01	Wine grape	cytosol	57.93	69.34
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	79.67	67.94
PGSC0003DMT400029275	Potato	cytosol	33.33	60.52
PGSC0003DMT400029354	Potato	cytosol	33.54	57.69
Solyc10g005420.1.1	Tomato	cytosol	9.15	54.88
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	71.75	54.73
PGSC0003DMT400029266	Potato	cytosol	45.33	53.48
KRH41974	Soybean	cytosol	30.89	52.23
PGSC0003DMT400029265	Potato	cytosol	54.27	52.05
KRH49914	Soybean	plastid	59.15	50.79
KRH21637	Soybean	cytosol	53.46	49.25
GSMUA_Achr2P03420_001	Banana	cytosol	46.95	47.93
Zm00001d053918_P001	Maize	cytosol	27.44	47.2
KRH49915	Soybean	plastid	55.49	46.43
Solyc05g026590.1.1	Tomato	cytosol	27.03	46.34
AT1G61680.1	Thale cress	plastid	52.64	45.52
GSMUA_Achr9P21010_001	Banana	cytosol	44.31	45.51
Solyc10g005390.2.1	Tomato	cytosol	52.03	45.47
EES04391	Sorghum	cytosol	38.01	44.84
Zm00001d053916_P002	Maize	cytosol	38.62	42.7
TraesCS6A01G067300.1	Wheat	cytosol	40.65	42.55
HORVU6Hr1G012090.1	Barley	cytosol	32.72	42.48
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	42.48	41.06
TraesCS2A01G478100.1	Wheat	cytosol	28.25	40.41
TraesCS6B01G091000.1	Wheat	cytosol	34.96	40.28
VIT_00s0724g00010.t01	Wine grape	cytosol	34.15	39.34
KXG29327	Sorghum	plastid	43.9	39.27
VIT_13s0067g00300.t01	Wine grape	cytosol	12.6	39.24
VIT_12s0134g00140.t01	Wine grape	cytosol	23.17	39.04
TraesCS7A01G261500.1	Wheat	cytosol	13.41	38.82
VIT_12s0134g00090.t01	Wine grape	cytosol	23.17	38.78
VIT_00s2271g00010.t01	Wine grape	cytosol	30.89	38.48
TraesCS6B01G091200.1	Wheat	cytosol	13.21	38.24
VIT_13s0067g00090.t01	Wine grape	cytosol	27.03	38.0
TraesCS6B01G092000.1	Wheat	plastid	41.87	37.94
TraesCS6A01G067500.1	Wheat	plastid	39.23	37.84
Solyc10g005410.2.1	Tomato	plastid	48.17	37.68
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	41.67	37.61
HORVU6Hr1G012270.1	Barley	plastid	41.46	37.5
VIT_13s0067g03770.t01	Wine grape	cytosol	26.42	37.46
EES04392	Sorghum	plastid	42.07	37.43
TraesCS6D01G048600.1	Wheat	plastid	41.06	37.06
TraesCS6D01G065200.1	Wheat	plastid	40.85	36.88
EES04390	Sorghum	plastid	42.28	36.88
TraesCS6B01G091500.1	Wheat	plastid	41.06	36.66
TraesCS6A01G067800.1	Wheat	plastid	40.85	36.61
VIT_12s0134g00040.t01	Wine grape	mitochondrion	16.67	36.61
VIT_00s0392g00030.t01	Wine grape	cytosol	23.58	36.59
TraesCS2B01G501400.1	Wheat	plastid	40.65	36.36
TraesCS6B01G092800.1	Wheat	plastid	40.45	36.25
TraesCS6D01G065100.1	Wheat	plastid	40.45	36.18
VIT_18s0001g04200.t01	Wine grape	cytosol	8.74	36.13
TraesCS6B01G090500.1	Wheat	plastid	40.65	35.84
TraesCS6B01G091700.1	Wheat	plastid	39.84	35.83
TraesCSU01G116700.1	Wheat	plastid	40.04	35.82
Os10t0489500-00	Rice	cytosol	37.2	35.81
Zm00001d015053_P001	Maize	plastid	42.28	35.8
TraesCS6B01G091100.1	Wheat	plastid	39.84	35.64
TraesCSU01G116600.1	Wheat	plastid	39.84	35.64
HORVU6Hr1G012170.1	Barley	plastid	39.63	35.52
EES04394	Sorghum	endoplasmic reticulum	42.89	35.46
TraesCS6A01G067700.1	Wheat	plastid	39.63	35.45
TraesCS6B01G091300.1	Wheat	plastid	39.63	35.45
TraesCSU01G116900.1	Wheat	plastid	40.24	35.29
TraesCS6A01G067600.1	Wheat	plastid	39.43	35.27
TraesCS6B01G091400.1	Wheat	plastid	40.24	35.23
TraesCS2D01G477300.1	Wheat	plastid	40.45	35.22
Zm00001d015054_P001	Maize	plastid	41.06	35.19
VIT_13s0067g03740.t01	Wine grape	cytosol	30.08	35.07
TraesCS6B01G090800.1	Wheat	plastid	39.02	34.97
TraesCS7D01G540300.1	Wheat	cytosol, plastid	38.21	34.56
HORVU6Hr1G012110.1	Barley	plastid	42.07	34.33
Os02t0121700-01	Rice	plastid	41.46	34.29
VIT_13s0084g00010.t01	Wine grape	cytosol	38.21	34.12
VIT_13s0067g03700.t01	Wine grape	cytosol	38.62	33.57
VIT_13s0067g00320.t01	Wine grape	cytosol	7.93	33.05
VIT_13s0067g00370.t01	Wine grape	plastid	38.82	32.37
VIT_13s0019g00060.t01	Wine grape	plastid	38.41	31.82
VIT_13s0067g03790.t01	Wine grape	plastid	38.21	31.7
VIT_13s0067g00130.t01	Wine grape	plastid	33.33	31.48
VIT_12s0134g00030.t01	Wine grape	mitochondrion	36.59	31.09
VIT_00s0361g00060.t01	Wine grape	cytosol	35.16	30.57
VIT_12s0134g00020.t01	Wine grape	plastid	36.38	29.78
VIT_13s0067g03830.t01	Wine grape	plastid	26.63	29.77
VIT_12s0059g02720.t01	Wine grape	plastid	22.56	28.61
VIT_12s0059g02710.t01	Wine grape	plastid	29.27	27.75
VIT_00s0392g00060.t01	Wine grape	cytosol	23.58	27.68
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.65	24.84
VIT_08s0007g06860.t01	Wine grape	plastid	14.23	24.39
VIT_18s0001g04510.t01	Wine grape	plastid	14.23	22.88
VIT_18s0001g05430.t01	Wine grape	cytosol	18.29	18.67

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100248531	wikigene:100248531	MapMan:9.1.4.2	EMBL:AM425105
ProteinID:CAN66667	ProteinID:CAN66667.1	ProteinID:CCB62874	ProteinID:CCB62874.1	UniProt:F6I7F6	EMBL:FN596782
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
EntrezGene:LOC100248531	wikigene:LOC100248531	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF40
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000210ABDC	ArrayExpress:VIT_00s0271g00010	EnsemblPlantsGene:VIT_00s0271g00010	EnsemblPlants:VIT_00s0271g00010.t01	SEG:seg

Description

No Description!

Coordinates

chrUn:+:20036820..20038921

Molecular Weight (calculated)

56483.8 Da

IEP (calculated)

5.682

GRAVY (calculated)

-0.323

Length

492 amino acids

Sequence
(BLAST)

001: MESMMMIDAI QRLGIDHHFE EEIEAVLQKQ YMKSSIHGDC DEDLYEVALR FRLLRQEGYT LPADVLNNFK NKEGKFKQNL REDIRGLMGL YEASQLSIGE
101: DILEEAGNFS SLLLNACLQH LDRHQAAVVK NTLEHPHHKS LARFMTKNFL TDFQGTNGWI NALQELANID FNMVKSVHQK EMLQISKWWK DLGLTEELKF
201: ARDQPLKWYM WPMAIIPDPR LSEQRIELTK PISLIYIIDD IFDVGGTLDE LTLFTEAVNR WDLSAFKELP EYMKMCFKTL DDITNEISTK VHKVHKNPVG
301: SLRKAWASLC NAFLVEAKWF ASGHVPKAEE YLKNGAVSSG VHVVLVHLFF LLGHGITKEN VDLVDDFPGI ISSTATILRL WDDLGSAKDE NQDGHDGSYV
401: ECYLKEHRGS SVENARQIVA HMISDMWKRL NKECLSPNPF STSFTKGSLN IARMVPLMYS YDDQQCLPGL EEHMKSLLLE NLPYRNAQKI NE

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.