Factsheet for TraesCS2A01G478100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G501400.1	Wheat	plastid	94.48	59.09
TraesCS2D01G477300.1	Wheat	plastid	93.6	56.99
TraesCS6A01G067300.1	Wheat	cytosol	74.42	54.47
TraesCS6A01G067500.1	Wheat	plastid	79.36	53.53
TraesCS6A01G067800.1	Wheat	plastid	82.85	51.91
TraesCS6A01G067700.1	Wheat	plastid	82.27	51.45
EES04391	Sorghum	cytosol	60.47	49.88
TraesCS6A01G067600.1	Wheat	plastid	79.65	49.82
Zm00001d053916_P002	Maize	cytosol	59.3	45.84
Zm00001d053918_P001	Maize	cytosol	37.21	44.76
Os10t0489500-00	Rice	cytosol	62.79	42.27
TraesCS7A01G261500.1	Wheat	cytosol	20.64	41.76
KXG29327	Sorghum	plastid	62.5	39.09
EES04392	Sorghum	plastid	61.92	38.52
EES04390	Sorghum	plastid	62.21	37.94
Os02t0121700-01	Rice	plastid	65.12	37.65
Zm00001d015054_P001	Maize	plastid	59.01	35.37
EES04394	Sorghum	endoplasmic reticulum	60.76	35.13
Zm00001d015053_P001	Maize	plastid	58.72	34.77
PGSC0003DMT400029275	Potato	cytosol	27.03	34.32
VIT_00s0372g00060.t01	Wine grape	cytosol	17.73	32.62
GSMUA_Achr2P03420_001	Banana	cytosol	45.35	32.37
GSMUA_Achr9P21010_001	Banana	cytosol	43.02	30.9
VIT_00s0372g00020.t01	Wine grape	cytosol	36.34	30.79
VIT_00s0572g00010.t01	Wine grape	cytosol	38.66	29.56
PGSC0003DMT400029354	Potato	cytosol	24.13	29.02
VIT_00s0271g00030.t01	Wine grape	cytosol	40.12	28.63
VIT_00s0266g00020.t01	Wine grape	cytosol	40.41	28.54
VIT_00s0271g00010.t01	Wine grape	cytosol	40.41	28.25
VIT_00s0572g00020.t01	Wine grape	cytosol	38.66	26.23
VIT_00s0266g00010.t01	Wine grape	cytosol	38.66	26.23
VIT_00s0372g00040.t01	Wine grape	cytosol	38.37	26.04
VIT_00s0266g00070.t01	Wine grape	cytosol	38.66	25.73
PGSC0003DMT400029265	Potato	cytosol	38.08	25.54
PGSC0003DMT400029266	Potato	cytosol	30.52	25.18
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	40.7	24.26
KRH49914	Soybean	plastid	39.53	23.73
VIT_00s0847g00020.t01	Wine grape	cytosol	27.33	22.87
Solyc10g005390.2.1	Tomato	cytosol	36.34	22.2
KRH21637	Soybean	cytosol	34.3	22.1
VIT_00s0385g00020.t01	Wine grape	cytosol	31.98	21.65
KRH41974	Soybean	cytosol	18.02	21.31
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	38.66	20.62
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	29.07	20.41
AT1G61680.1	Thale cress	plastid	33.72	20.39
Solyc10g005410.2.1	Tomato	plastid	35.76	19.55
KRH49915	Soybean	plastid	32.56	19.05
TraesCS7A01G500100.1	Wheat	cytosol	29.36	16.69
TraesCS2A01G022600.1	Wheat	plastid	27.03	16.12
TraesCS2A01G022400.1	Wheat	plastid	25.58	15.52
TraesCS2A01G022300.1	Wheat	plastid	25.87	14.96
Solyc05g026590.1.1	Tomato	cytosol	11.34	13.59
TraesCS7A01G499300.2	Wheat	cytosol	19.77	12.34
Solyc10g005420.1.1	Tomato	cytosol	2.03	8.54

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
EnsemblPlantsGene:TraesCS2A01G478100	EnsemblPlants:TraesCS2A01G478100.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2A:+:717137853..717140372

Molecular Weight (calculated)

39822.7 Da

IEP (calculated)

7.472

GRAVY (calculated)

-0.413

Length

344 amino acids

Sequence
(BLAST)

001: MADDVLRKFT NDNGDFNHGL TKDIRGMLSL QDMSYLNMGE SSLYKANEFS AKHLRLAIKY LEPSLARYVR RSLDHPYHVS LMQYKARHHL SYLQNLPTRN
101: TSIENLALAE FQIKKLQHQR EIKEVKRWDP AAAVDSLPSY MISCYKALYT VTNDIAAMVR KEHGLNPITH IKQAWAAFFD GFMIEGKWLY TNQAPTSEDY
201: LRNGIVTSGA PLVFLHLFFL LGHDFTEGNN DRILRIISCT AKIMRLWDDM GSAKDESQAG LDGSCKELYH RENPHGDAEK HMLKMIASEW QDLNRECFSG
301: TNSTLSHTFI RASLNFARMV RVMYSYDDEQ RLPILEDYTR MLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.