Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053918_P001 | Maize | cytosol | 52.13 | 81.12 |
| EES04392 | Sorghum | plastid | 80.45 | 64.74 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 54.83 | 64.38 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 23.6 | 61.76 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 23.15 | 60.59 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 45.84 | 59.3 |
| EES04394 | Sorghum | endoplasmic reticulum | 78.88 | 58.99 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 56.18 | 58.55 |
| Zm00001d015053_P001 | Maize | plastid | 76.18 | 58.35 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 60.22 | 57.02 |
| Zm00001d015054_P001 | Maize | plastid | 73.48 | 56.97 |
| TraesCS6A01G067500.1 | Wheat | plastid | 62.02 | 54.12 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 60.45 | 52.85 |
| Os10t0489500-00 | Rice | cytosol | 60.0 | 52.25 |
| TraesCSU01G116600.1 | Wheat | plastid | 62.7 | 50.73 |
| TraesCS6B01G091100.1 | Wheat | plastid | 62.47 | 50.55 |
| TraesCS6A01G067600.1 | Wheat | plastid | 62.25 | 50.36 |
| TraesCS6B01G091300.1 | Wheat | plastid | 62.02 | 50.18 |
| TraesCS6B01G090800.1 | Wheat | plastid | 61.8 | 50.09 |
| TraesCSU01G116700.1 | Wheat | plastid | 61.8 | 50.0 |
| TraesCS6D01G065200.1 | Wheat | plastid | 60.67 | 49.54 |
| TraesCS6D01G065100.1 | Wheat | plastid | 61.12 | 49.45 |
| TraesCS6B01G092800.1 | Wheat | plastid | 60.9 | 49.36 |
| HORVU6Hr1G012270.1 | Barley | plastid | 60.22 | 49.26 |
| TraesCS6D01G048600.1 | Wheat | plastid | 60.22 | 49.17 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 60.22 | 49.17 |
| TraesCS6B01G091500.1 | Wheat | plastid | 60.67 | 49.0 |
| TraesCS6B01G090500.1 | Wheat | plastid | 61.35 | 48.92 |
| TraesCS6A01G067700.1 | Wheat | plastid | 60.45 | 48.91 |
| TraesCS2B01G501400.1 | Wheat | plastid | 60.22 | 48.73 |
| TraesCS6A01G067800.1 | Wheat | plastid | 60.0 | 48.63 |
| HORVU6Hr1G012170.1 | Barley | plastid | 59.78 | 48.45 |
| TraesCS6B01G091700.1 | Wheat | plastid | 59.1 | 48.08 |
| Os02t0121700-01 | Rice | plastid | 64.27 | 48.07 |
| TraesCS6B01G092000.1 | Wheat | plastid | 58.65 | 48.07 |
| TraesCSU01G116900.1 | Wheat | plastid | 60.22 | 47.77 |
| TraesCS6B01G091400.1 | Wheat | plastid | 60.22 | 47.69 |
| TraesCS2D01G477300.1 | Wheat | plastid | 59.55 | 46.9 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 19.55 | 46.52 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 56.4 | 46.14 |
| HORVU6Hr1G012110.1 | Barley | plastid | 60.67 | 44.78 |
| PGSC0003DMT400029275 | Potato | cytosol | 25.84 | 42.44 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 45.39 | 41.91 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 38.2 | 41.87 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 43.82 | 40.71 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 41.12 | 40.67 |
| Solyc10g005420.1.1 | Tomato | cytosol | 7.42 | 40.24 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 42.7 | 39.42 |
| PGSC0003DMT400029354 | Potato | cytosol | 25.17 | 39.16 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 42.7 | 38.62 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 42.25 | 38.6 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 41.8 | 36.69 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 41.57 | 36.49 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 41.57 | 36.49 |
| PGSC0003DMT400029266 | Potato | cytosol | 33.26 | 35.49 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 32.58 | 35.28 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 40.67 | 35.01 |
| PGSC0003DMT400029265 | Potato | cytosol | 38.43 | 33.33 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 42.7 | 32.93 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 36.4 | 31.89 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 33.93 | 30.82 |
| KRH21637 | Soybean | cytosol | 36.85 | 30.71 |
| KRH49915 | Soybean | plastid | 39.1 | 29.59 |
| KRH49914 | Soybean | plastid | 37.98 | 29.49 |
| Solyc10g005390.2.1 | Tomato | cytosol | 36.4 | 28.77 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 41.57 | 28.68 |
| AT1G61680.1 | Thale cress | plastid | 36.63 | 28.65 |
| KRH41974 | Soybean | cytosol | 17.75 | 27.15 |
| Solyc05g026590.1.1 | Tomato | cytosol | 16.18 | 25.09 |
| Solyc10g005410.2.1 | Tomato | plastid | 34.61 | 24.48 |
| Zm00001d018611_P001 | Maize | cytosol, extracellular, mitochondrion, peroxisome | 20.9 | 21.88 |
| Zm00001d004279_P001 | Maize | mitochondrion | 22.7 | 20.95 |
| Zm00001d029523_P001 | Maize | cytosol | 20.9 | 18.38 |
| Zm00001d047440_P001 | Maize | cytosol | 11.91 | 17.85 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | UniProt:A0A1D6QTD4 | ProteinID:AQK60700.1 | GO:GO:0000287 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 |
| GO:GO:0016829 | GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 |
| PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00084345C8 | EnsemblPlantsGene:Zm00001d053916 |
| EnsemblPlants:Zm00001d053916_P002 | EnsemblPlants:Zm00001d053916_T002 | SEG:seg | : | : | : |
Description
S-(+)-linalool synthase chloroplastic
Coordinates
chr4:-:243626842..243629259
Molecular Weight (calculated)
51287.6 Da
IEP (calculated)
6.200
GRAVY (calculated)
-0.210
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MMMSTVDRRR LNMHGCTALH IPADDVLRRF TDDDDSGGEF RLDLSKDIRG LLSLHDMSHL DMGGEELLCK ARVFSRHHLA SAVRYLEPSL GEYVRQSLDH
101: PYHLSLTQYK ARHHLAYLQS LPVRDTALER LVAAEFQLNR SLHQKEMQAI KRWWMELGLV QEIPVVRDQV LKWYMWSMTA LQGRSFSRHR VQITKIIALV
201: YVVDDIFDLV ATLDELSLFA EAVKMWNSTA AESLPSYMRS CYKALYTVTN EIADTAEKEH GLNHVNHLRK AWAALFDGFM VEARWLATDK VPTAEDYLTN
301: GVVTSGVPLT FVHIFIMLGC DDDQSTQALV DHMPSVISCP AKILRLWDDM GSAEDEAQEG FDGSYRDFYL MENPRCSRSD AEAHMRSLIA REWEELNREC
401: LCKRTFSSSF THVCLNAARM ISVMYSYNKE QRLLVLEDYA RMLIL
101: PYHLSLTQYK ARHHLAYLQS LPVRDTALER LVAAEFQLNR SLHQKEMQAI KRWWMELGLV QEIPVVRDQV LKWYMWSMTA LQGRSFSRHR VQITKIIALV
201: YVVDDIFDLV ATLDELSLFA EAVKMWNSTA AESLPSYMRS CYKALYTVTN EIADTAEKEH GLNHVNHLRK AWAALFDGFM VEARWLATDK VPTAEDYLTN
301: GVVTSGVPLT FVHIFIMLGC DDDQSTQALV DHMPSVISCP AKILRLWDDM GSAEDEAQEG FDGSYRDFYL MENPRCSRSD AEAHMRSLIA REWEELNREC
401: LCKRTFSSSF THVCLNAARM ISVMYSYNKE QRLLVLEDYA RMLIL
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.