Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G012090.1 | Barley | cytosol | 71.19 | 80.21 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 28.57 | 71.76 |
| TraesCS6B01G090800.1 | Wheat | plastid | 92.04 | 71.58 |
| TraesCS6B01G091100.1 | Wheat | plastid | 88.06 | 68.36 |
| TraesCS6B01G091300.1 | Wheat | plastid | 87.82 | 68.18 |
| TraesCS6B01G091500.1 | Wheat | plastid | 80.33 | 62.25 |
| TraesCS2B01G501400.1 | Wheat | plastid | 79.63 | 61.82 |
| TraesCS6B01G092800.1 | Wheat | plastid | 79.39 | 61.75 |
| TraesCS6B01G091400.1 | Wheat | plastid | 79.86 | 60.68 |
| EES04391 | Sorghum | cytosol | 59.02 | 60.43 |
| TraesCS6B01G091700.1 | Wheat | plastid | 76.81 | 59.96 |
| TraesCS6B01G090500.1 | Wheat | plastid | 76.81 | 58.78 |
| Zm00001d053916_P002 | Maize | cytosol | 58.55 | 56.18 |
| Os10t0489500-00 | Rice | cytosol | 66.04 | 55.19 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 69.32 | 54.31 |
| Zm00001d053918_P001 | Maize | cytosol | 35.6 | 53.15 |
| TraesCS6B01G092000.1 | Wheat | plastid | 67.21 | 52.85 |
| KXG29327 | Sorghum | plastid | 66.04 | 51.27 |
| EES04392 | Sorghum | plastid | 64.4 | 49.73 |
| EES04390 | Sorghum | plastid | 65.57 | 49.65 |
| Os02t0121700-01 | Rice | plastid | 66.98 | 48.07 |
| EES04394 | Sorghum | endoplasmic reticulum | 65.11 | 46.72 |
| Zm00001d015053_P001 | Maize | plastid | 62.3 | 45.78 |
| Zm00001d015054_P001 | Maize | plastid | 60.42 | 44.95 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 43.33 | 38.38 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 39.58 | 37.56 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 41.92 | 37.37 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 35.36 | 37.19 |
| PGSC0003DMT400029275 | Potato | cytosol | 23.42 | 36.9 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 16.16 | 36.9 |
| PGSC0003DMT400029354 | Potato | cytosol | 24.59 | 36.71 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 40.98 | 36.31 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 40.05 | 35.11 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 40.28 | 34.96 |
| Solyc10g005420.1.1 | Tomato | cytosol | 6.56 | 34.15 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 39.81 | 33.53 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 39.81 | 33.53 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 39.34 | 33.14 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 38.41 | 31.72 |
| PGSC0003DMT400029266 | Potato | cytosol | 30.91 | 31.65 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 30.45 | 31.63 |
| PGSC0003DMT400029265 | Potato | cytosol | 37.7 | 31.38 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 41.22 | 30.5 |
| KRH21637 | Soybean | cytosol | 37.47 | 29.96 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 33.72 | 28.35 |
| KRH49914 | Soybean | plastid | 37.24 | 27.75 |
| Solyc10g005390.2.1 | Tomato | cytosol | 36.3 | 27.53 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 31.38 | 27.35 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 39.58 | 26.2 |
| KRH49915 | Soybean | plastid | 35.13 | 25.51 |
| AT1G61680.1 | Thale cress | plastid | 33.26 | 24.96 |
| Solyc10g005410.2.1 | Tomato | plastid | 36.3 | 24.64 |
| KRH41974 | Soybean | cytosol | 16.63 | 24.4 |
| TraesCS2B01G031400.1 | Wheat | cytosol | 14.99 | 23.79 |
| TraesCS2B01G031300.1 | Wheat | cytosol | 14.99 | 23.79 |
| Solyc05g026590.1.1 | Tomato | cytosol | 15.69 | 23.34 |
| TraesCS2B01G030900.1 | Wheat | plastid | 23.18 | 20.97 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 25.29 | 20.77 |
| TraesCS7B01G407200.1 | Wheat | cytosol | 27.63 | 20.21 |
| TraesCS2B01G031100.1 | Wheat | plastid | 26.0 | 19.58 |
| TraesCS2B01G031000.1 | Wheat | plastid | 25.53 | 19.16 |
| TraesCS2B01G032300.2 | Wheat | plastid | 25.29 | 19.05 |
| TraesCS2B01G064700.1 | Wheat | cytosol, extracellular | 8.2 | 19.02 |
| TraesCS2B01G031500.1 | Wheat | plastid | 22.72 | 18.2 |
| TraesCS6B01G008700.1 | Wheat | cytosol | 22.25 | 17.43 |
| TraesCS5B01G018200.1 | Wheat | cytosol, mitochondrion, plastid | 19.2 | 14.88 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:50.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| EnsemblPlantsGene:TraesCS6B01G091000 | EnsemblPlants:TraesCS6B01G091000.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6B:-:66783418..66786624
Molecular Weight (calculated)
49761.9 Da
IEP (calculated)
7.371
GRAVY (calculated)
-0.412
Length
427 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSCVDLIHS DDLLDATLSL RLMREAGYSI SADDVLRKFT NNNGDFNLRH SKDLRGLLSL QDMSHLNMRE ASLYKAKEFS RKHLKFAIKY LEPNLARYVM
101: KSLDHPYHVS LMQYKARHHL SYLKNLPTRH TAIETLAVAE FQIKKLQHQR EMQEVKRWWM DLGLAQEIPA ARDQVLKWYM WSMTILDGLS FSRYRVEATK
201: KFHTQSAHFD RWDLAAAESL PSYMKSCYKA IYTITNDIAD MVRKEHGFNP INHLKKAWAS LFDGFMIEGK WLSTNQIPTS EDYLRNGIIT SGAPLLFMHL
301: LFMLGHDVTD DNNHHILRVI SCPAKIMRLW DDMGSAKDEL QEGLDGSYKD LYQRENPHAD AEKHMLHMIA CEWGDLNREC FSQTKSTLPP CFIGASLNFA
401: RMVSIMYGYD DEQRLPSLED YTRMLLF
101: KSLDHPYHVS LMQYKARHHL SYLKNLPTRH TAIETLAVAE FQIKKLQHQR EMQEVKRWWM DLGLAQEIPA ARDQVLKWYM WSMTILDGLS FSRYRVEATK
201: KFHTQSAHFD RWDLAAAESL PSYMKSCYKA IYTITNDIAD MVRKEHGFNP INHLKKAWAS LFDGFMIEGK WLSTNQIPTS EDYLRNGIIT SGAPLLFMHL
301: LFMLGHDVTD DNNHHILRVI SCPAKIMRLW DDMGSAKDEL QEGLDGSYKD LYQRENPHAD AEKHMLHMIA CEWGDLNREC FSQTKSTLPP CFIGASLNFA
401: RMVSIMYGYD DEQRLPSLED YTRMLLF
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.