Factsheet for TraesCS2B01G064700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	34.24	12.6
KRH26850	Soybean	nucleus, plastid	37.5	12.15
TraesCS2B01G030900.1	Wheat	plastid	30.43	11.86
TraesCS6B01G008700.1	Wheat	cytosol	34.24	11.56
KRH22498	Soybean	plastid	35.33	11.23
KRH26852	Soybean	plastid	34.78	10.96
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	32.61	10.89
TraesCS2B01G031600.1	Wheat	mitochondrion	30.43	10.77
TraesCS2B01G031100.1	Wheat	plastid	30.98	10.05
TraesCS6B01G091200.1	Wheat	cytosol	9.24	10.0
TraesCS2B01G031000.1	Wheat	plastid	30.43	9.84
TraesCS2B01G032300.2	Wheat	plastid	29.35	9.52
TraesCS2B01G031500.1	Wheat	plastid	26.09	9.01
TraesCS7B01G407200.1	Wheat	cytosol	28.26	8.9
TraesCS6B01G092000.1	Wheat	plastid	25.54	8.66
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	24.46	8.26
TraesCS6B01G091000.1	Wheat	cytosol	19.02	8.2
TraesCS2B01G501400.1	Wheat	plastid	24.46	8.18
TraesCS6B01G091500.1	Wheat	plastid	24.46	8.17
TraesCS6B01G092800.1	Wheat	plastid	23.91	8.01
TraesCS6B01G091100.1	Wheat	plastid	22.83	7.64
TraesCS6B01G090500.1	Wheat	plastid	22.83	7.53
TraesCS6B01G091700.1	Wheat	plastid	22.28	7.5
TraesCS6B01G090800.1	Wheat	plastid	22.28	7.47
TraesCS6B01G091300.1	Wheat	plastid	22.28	7.45
TraesCS6B01G091400.1	Wheat	plastid	22.28	7.3
TraesCS2B01G031400.1	Wheat	cytosol	10.33	7.06
TraesCS2B01G031300.1	Wheat	cytosol	10.33	7.06
VIT_12s0134g00090.t01	Wine grape	cytosol	0.0	0.0
VIT_12s0134g00140.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS2B01G064700.1	EnsemblPlantsGene:TraesCS2B01G064700	Gene3D:1.10.600.10	Gene3D:1.50.10.130	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase	PANTHER:PTHR31225	PANTHER:PTHR31225:SF41
PFAM:PF01397	SEG:seg	SUPFAM:SSF48239	SUPFAM:SSF48576	MapMan:50.4.2	:

Description

No Description!

Coordinates

chr2B:+:31060285..31060920

Molecular Weight (calculated)

20912.3 Da

IEP (calculated)

5.930

GRAVY (calculated)

-0.076

Length

184 amino acids

Sequence
(BLAST)

001: MKLVDAIQRL GIAHLFEIQI GTALCDIHEN ELNISSLREV ALRFCHLREH VLWVSPDVFN KFRGEDGTFN EDIKNDPKGI LCLYNAAYML THGGPELEGA
101: ISLARHHLES LAPSLGSPLA EQVKHALHVP LPRTYRRLDA LCYILEYEQE EGPNPILLEL AKLEFNLLQA VHLKELKAIS EYFH

Best Arabidopsis Sequence Match ( AT5G23960.2 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE YSICNIIPIP DSMKFIYNVT VEFYDKLDEE LEKEGRSGCG FHLKKSLQKT ANGYMQEAKW LKKDYIATFD EYKENAILSS
401: GYYALIAMTF VRMTDVAKLD AFEWLSSHPK IRVASEIISR FTDDISSYEF EHKREHVATG IDCYMQQFGV SKERAVEVMG NIVSDAWKDL NQELMRPHVF
501: PFPLLMRVLN LSRVIDVFYR YQDAYTNPKL LKEHIVSLLI ETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.