Factsheet for VIT_12s0134g00140.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0134g00090.t01	Wine grape	cytosol	98.63	97.96
VIT_00s0372g00060.t01	Wine grape	cytosol	30.48	47.59
VIT_13s0067g00320.t01	Wine grape	cytosol	15.75	38.98
VIT_13s0067g00090.t01	Wine grape	cytosol	44.52	37.14
VIT_13s0067g03770.t01	Wine grape	cytosol	42.81	36.02
VIT_00s0392g00030.t01	Wine grape	cytosol	38.01	35.02
VIT_12s0134g00040.t01	Wine grape	mitochondrion	26.37	34.38
VIT_13s0067g00300.t01	Wine grape	cytosol	18.49	34.18
GSMUA_Achr11P...	Banana	cytosol	56.85	33.2
KRH26850	Soybean	nucleus, plastid	60.96	31.34
VIT_00s2271g00010.t01	Wine grape	cytosol	40.07	29.62
KRH22498	Soybean	plastid	57.53	29.02
KRH26852	Soybean	plastid	57.19	28.6
VIT_13s0067g03740.t01	Wine grape	cytosol	41.1	28.44
VIT_00s0372g00020.t01	Wine grape	cytosol	38.01	27.34
VIT_00s0572g00010.t01	Wine grape	cytosol	39.73	25.78
VIT_00s0271g00030.t01	Wine grape	cytosol	39.38	23.86
VIT_00s0724g00010.t01	Wine grape	cytosol	34.59	23.65
VIT_13s0084g00010.t01	Wine grape	cytosol	44.52	23.59
VIT_00s0271g00010.t01	Wine grape	cytosol	39.04	23.17
VIT_00s0372g00040.t01	Wine grape	cytosol	40.07	23.08
VIT_00s0266g00010.t01	Wine grape	cytosol	40.07	23.08
VIT_00s0572g00020.t01	Wine grape	cytosol	40.07	23.08
VIT_00s0266g00020.t01	Wine grape	cytosol	38.36	23.0
VIT_13s0067g03700.t01	Wine grape	cytosol	43.15	22.26
VIT_00s0847g00020.t01	Wine grape	cytosol	30.14	21.41
VIT_13s0067g00370.t01	Wine grape	plastid	43.15	21.36
VIT_00s0266g00070.t01	Wine grape	cytosol	36.99	20.89
VIT_13s0067g03790.t01	Wine grape	plastid	41.44	20.4
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	40.07	20.28
VIT_13s0019g00060.t01	Wine grape	plastid	41.1	20.2
VIT_00s0385g00020.t01	Wine grape	cytosol	33.9	19.49
VIT_00s0361g00060.t01	Wine grape	cytosol	37.67	19.43
VIT_12s0134g00030.t01	Wine grape	mitochondrion	37.67	19.0
VIT_13s0067g00130.t01	Wine grape	plastid	33.22	18.62
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.16	18.57
VIT_12s0134g00020.t01	Wine grape	plastid	38.01	18.47
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	39.38	17.83
VIT_12s0059g02710.t01	Wine grape	plastid	30.14	16.96
VIT_13s0067g03830.t01	Wine grape	plastid	20.21	13.41
VIT_00s0392g00060.t01	Wine grape	cytosol	17.81	12.41
VIT_12s0059g02720.t01	Wine grape	plastid	13.01	9.79
VIT_18s0001g05430.t01	Wine grape	cytosol	4.11	2.49
VIT_18s0001g04510.t01	Wine grape	plastid	0.68	0.65
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	0.68	0.65
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	0.0	0.0
VIT_08s0007g06860.t01	Wine grape	plastid	0.0	0.0
VIT_18s0001g04200.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	EntrezGene:100244791	wikigene:100244791	EntrezGene:100261928	wikigene:100261928	MapMan:9.1.4.2
ProteinID:ADR74217	ProteinID:ADR74217.1	ProteinID:ADR74218	ProteinID:ADR74218.1	ProteinID:CBI17975	ProteinID:CBI17975.3
UniProt:D7SQP4	EMBL:FN594966	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EMBL:HM807398
EMBL:HM807399	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	EntrezGene:LOC100244791	wikigene:LOC100244791	EntrezGene:LOC100261928
wikigene:LOC100261928	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF11	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synthase_metal-bd	UniParc:UPI0001BE12E1	ArrayExpress:VIT_12s0134g00140	EnsemblPlantsGene:VIT_12s0134g00140	EnsemblPlants:VIT_12s0134g00140.t01	RefSeq:XP_003633319
RefSeq:XP_003633319.1	:	:	:	:	:

Description

No Description!

Coordinates

chr12:+:7689904..7691283

Molecular Weight (calculated)

33187.8 Da

IEP (calculated)

4.944

GRAVY (calculated)

-0.121

Length

292 amino acids

Sequence
(BLAST)

001: MECFLWTVGI FPDPRHSSCR IELTKAIAIL LVIDDIYDSY GSLDELALFT DAVKRWDLGA MDQLPEYMKI CYMALYNTTN DIAYRILKEH GWSVIEDLKR
101: TWMDIFGAFL AEAYCFKGGH VPSLEEYLTN AVTTGGTYMA LVHAFFLMGQ GVTRENMAML KPYPNIFSCS GKILRLWDDL GTAREEQERG DNASSIECYK
201: REREMDTVLE DEACRKHIRQ MIQSLWVELN GELVASSALP LSIIKAAFNL SRTAQVIYQH GDDNKTSSVE DHVQALLFRP VSSNGHAQIT MH

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.