Factsheet for GSMUA_Achr11P18660_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0134g00140.t01	Wine grape	cytosol	33.2	56.85
VIT_12s0134g00090.t01	Wine grape	cytosol	32.8	55.78
KRH26850	Soybean	nucleus, plastid	49.8	43.84
KRH22498	Soybean	plastid	48.6	41.97
KRH26852	Soybean	plastid	49.0	41.95
GSMUA_Achr9P21010_001	Banana	cytosol	36.2	37.79
GSMUA_Achr2P03420_001	Banana	cytosol	36.4	37.76
GSMUA_Achr4P07690_001	Banana	cytosol	12.4	36.26
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	28.8	34.62
GSMUA_Achr4P07700_001	Banana	plastid	39.8	34.25
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	12.6	34.24
GSMUA_Achr7P25710_001	Banana	mitochondrion	39.6	34.2
GSMUA_Achr7P25700_001	Banana	plastid	39.4	33.91
GSMUA_Achr4P07680_001	Banana	plastid	37.0	33.58
GSMUA_AchrUn_...	Banana	plastid	28.4	33.57
GSMUA_AchrUn_...	Banana	plastid	39.0	33.51
GSMUA_Achr4P08100_001	Banana	plastid	35.8	32.66
GSMUA_Achr7P25720_001	Banana	plastid	38.0	32.48
GSMUA_AchrUn_...	Banana	plastid	31.0	32.09
GSMUA_Achr6P24330_001	Banana	cytosol	9.0	31.91
GSMUA_Achr6P24340_001	Banana	cytosol	9.4	31.54
GSMUA_Achr7P25740_001	Banana	plastid	37.0	30.99
GSMUA_Achr4P08090_001	Banana	plastid	33.0	30.11
GSMUA_AchrUn_...	Banana	plastid	28.0	29.91
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	15.0	29.88

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EnsemblPlantsGene:GSMUA_Achr11G18660_001	EnsemblPlants:GSMUA_Achr11P18660_001	EnsemblPlants:GSMUA_Achr11T18660_001	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M0RTE6	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF11	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000296DCF4	SEG:seg	:	:	:	:

Description

R-linalool synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr11G18660_001]

Coordinates

chr11:+:20010961..20012855

Molecular Weight (calculated)

56932.9 Da

IEP (calculated)

4.946

GRAVY (calculated)

-0.235

Length

500 amino acids

Sequence
(BLAST)

001: MVLVDTIQRL GISHQFEDEL ELILDRNPSA AQGDEDDLFS TTLRFRLLRQ RGYNVDTDVF HEFMDRKGHF KESLSKDLAG LLSLHEASYL GVRDEEVLSQ
101: AMGFSEEHLR RSMLNLRPVR AREVNLALEF PRQRRMVRSE ARSYIGKYAQ ESGRISDVLQ LATLDFNLVQ SQLRIEIAVL RSWWKELGLA EKLSFARDRP
201: LECFLWTVGL FPEPRFSQCR IEIAKTIAIL LVIDDVYDIQ GSLDELILFT DAVRRWGVEA MEDLPEYMKI CYMALYNTTN EIGYRVLKEH GRCIIRELRK
301: TWVDLCEGFL VEARWFSGGV VPEMEEYVGN GVSTAGTYMA FVHAFYLIGS GVNKQSSDVV NSCPKLFTSA GRILRLWDDL GTAKVEQERG DVASSIDCYM
401: KEGDGASEAE SRLHVRSLIH SSWLDLNGEA LAATSLPRST VDAALNLARA AQAMYQHGDD GRLPSVDQHI HWLLMEPIPE DNHISEEARV GRTSEFTVHE

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.