Factsheet for GSMUA_Achr7P25740_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25720_001	Banana	plastid	70.35	71.79
GSMUA_AchrUn_...	Banana	plastid	47.24	66.67
GSMUA_Achr7P25710_001	Banana	mitochondrion	63.32	65.28
GSMUA_Achr7P25700_001	Banana	plastid	63.15	64.89
GSMUA_AchrUn_...	Banana	plastid	50.59	64.53
GSMUA_AchrUn_...	Banana	plastid	62.48	64.09
GSMUA_Achr4P07700_001	Banana	plastid	61.98	63.68
GSMUA_Achr4P07680_001	Banana	plastid	58.63	63.52
GSMUA_Achr4P08100_001	Banana	plastid	58.29	63.5
GSMUA_AchrUn_...	Banana	plastid	49.25	60.87
GSMUA_Achr4P08090_001	Banana	plastid	53.94	58.76
GSMUA_Achr4P07690_001	Banana	cytosol	15.41	53.8
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	29.31	42.07
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	15.58	37.05
GSMUA_Achr11P...	Banana	cytosol	30.99	37.0
GSMUA_Achr6P24330_001	Banana	cytosol	7.71	32.62
GSMUA_Achr2P03420_001	Banana	cytosol	26.13	32.37
GSMUA_Achr9P21010_001	Banana	cytosol	25.96	32.36
GSMUA_Achr6P24340_001	Banana	cytosol	8.04	32.21

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G25740_001	EnsemblPlants:GSMUA_Achr7P25740_001	EnsemblPlants:GSMUA_Achr7T25740_001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	UniProt:M0TKR0	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002950A78	SEG:seg	:	:	:

Description

Putative Myrcene synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G25740_001]

Coordinates

chr7:-:27284652..27287287

Molecular Weight (calculated)

69854.7 Da

IEP (calculated)

6.032

GRAVY (calculated)

-0.367

Length

597 amino acids

Sequence
(BLAST)

001: MSLRLLTIVC ATSFPCSSLS AFRRIASFEH HGRDPCLSPG IRCSGQPLLR RSANYQPNLW TNDYIQSLTS DHSMEEQNAA RISNLEKEVV KLIQEEKELE
101: DQLQLIDHLQ QLGVAYHFKD DIKDALESIH GSLEDTSKLL KDNIHATALL FRLLRENGFD VSEDMFSRFK DEKGHLKTCL QHQTKGMLSL YEASYHGKEG
201: EFVLIEAMDF TTKHLKKLME EGSLEPRFRE HVAHALELPL NWRMERIHTR WFIETYQREA TMNPLLLELA KLDFNLIQIM HKRELKEVSR WWTDLDLAQR
301: LPFFRDRLME NYFWTVGWAF EPQFWSFREM QTKLVSLITV IDDVYDVYGS LDELELFTNV VDRWDVNAID KLPGYMKLCF LAVFNMANDA GYRVMKEKGL
401: DIIPYLKRAW VDLSKSYLLE AKWYHHGRTP KLGEYLDNAW TSISSPLLLT LAYCMSDDLT EEALRGICKY QDFARWSSML FRLYDDLATS KTELARGDVP
501: KSIQCYMHEK SVSEDVAREK VRELIRVNWR ALNGNRTSSS PLEEYFKRVA INISRMAQFY YEHGDGYGIP DGETKNQVLL LFIQPIELEI YTTNKVV

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.