Factsheet for GSMUA_AchrUn_randomP27860_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular

Predictor Summary:

nucleus 1
plastid 3
extracellular 4
endoplasmic reticulum 4
vacuole 3
plasma membrane 3
golgi 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	45.43	44.68
VIT_12s0059g02720.t01	Wine grape	plastid	40.38	43.3
VIT_08s0007g06860.t01	Wine grape	plastid	27.88	40.42
CDY15827	Canola	cytosol	14.42	38.71
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	22.36	37.05
GSMUA_AchrUn_...	Banana	plastid	40.62	36.11
VIT_12s0059g02710.t01	Wine grape	plastid	44.95	36.03
GSMUA_Achr4P07680_001	Banana	plastid	44.47	33.58
GSMUA_AchrUn_...	Banana	plastid	46.39	33.16
GSMUA_Achr7P25710_001	Banana	mitochondrion	45.43	32.64
GSMUA_Achr7P25700_001	Banana	plastid	45.19	32.36
GSMUA_Achr4P07700_001	Banana	plastid	44.71	32.01
GSMUA_Achr7P25720_001	Banana	plastid	43.51	30.94
GSMUA_Achr4P08100_001	Banana	plastid	40.62	30.84
GSMUA_Achr7P25740_001	Banana	plastid	42.07	29.31
GSMUA_Achr4P08090_001	Banana	plastid	38.22	29.01
GSMUA_Achr11P...	Banana	cytosol	34.62	28.8
GSMUA_AchrUn_...	Banana	plastid	32.93	28.36
GSMUA_Achr9P21010_001	Banana	cytosol	26.92	23.38
GSMUA_Achr2P03420_001	Banana	cytosol	26.68	23.03
GSMUA_Achr4P07690_001	Banana	cytosol	1.2	2.92
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EnsemblPlantsGene:GSMUA_AchrUn_randomG27860_001	EnsemblPlants:GSMUA_AchrUn_randomP27860_001	EnsemblPlants:GSMUA_AchrUn_randomT27860_001	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M0UCZ4	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000296B0A8	:	:	:	:	:

Description

Putative Myrcene synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG27860_001]

Coordinates

chrchrUn_random:-:135880911..135883151

Molecular Weight (calculated)

48537.2 Da

IEP (calculated)

6.294

GRAVY (calculated)

-0.381

Length

416 amino acids

Sequence
(BLAST)

001: MKQLLLVALI NPCIFHMQKP CRIMCLREEG ARSPRNTLEG SRRSADYHPS IWDHHLIQSI ESSYSDERFT ADLDELKLEA KYLLESYKEP SAQLHLIGSM
101: QRLGVAYHLG EEINESLGKI YTNGLWPNHD VHQTALGFRL LREHGHSVPS DVFEKYRDEK GFKKCLARDV RGLLSLYEAS HFAIDGEEIL DEANKFSAMH
201: LKLLEKQVDP HVAEQVRHSL EIPLRWRMPR LETKYFIDVY DRQECRNPVL LKLAKLDFNI VQSIHREEMR ELSKWWNELG LAQKLKFSRD RLLENYLWAV
301: GIAHEPQFSK CRVGLTKLIC ILTVIDDVYD VYGLPEEVKL FTAAVKAWDL EAMDTLPDYL KCCYLALHNF VNETAADIEK DHGWDATALF RKEVWESLCE
401: AYLTEAEWFH KGYKPT

Best Arabidopsis Sequence Match ( AT3G25810.1 )
(BLAST)

001: MATLCIGSAP IYQNACIHNF RLQRPRRFIS KSMTKTMPDA NPLDLRRRSG NYQPSSWDHS YLLSIENKYV NEKEVITRHV LKKKVKKMLE EVETKSRLEK
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD

Arabidopsis Description

TPS24Beta-myrcene/(E)-beta-ocimene synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.