Factsheet for GSMUA_AchrUn_randomP26640_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plastid	83.92	75.85
GSMUA_Achr4P07680_001	Banana	plastid	88.42	67.88
GSMUA_Achr4P08100_001	Banana	plastid	84.63	65.33
GSMUA_Achr4P07700_001	Banana	plastid	89.6	65.23
GSMUA_AchrUn_...	Banana	plastid	88.42	64.26
GSMUA_Achr4P08090_001	Banana	plastid	78.96	60.95
GSMUA_AchrUn_...	Banana	plastid	65.01	56.94
GSMUA_Achr7P25740_001	Banana	plastid	66.67	47.24
GSMUA_Achr7P25720_001	Banana	plastid	65.25	47.18
GSMUA_Achr7P25710_001	Banana	mitochondrion	64.54	47.15
GSMUA_Achr7P25700_001	Banana	plastid	64.07	46.64
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	44.68	45.43
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	21.99	37.05
GSMUA_Achr11P...	Banana	cytosol	33.57	28.4
GSMUA_Achr2P03420_001	Banana	cytosol	29.31	25.73
GSMUA_Achr9P21010_001	Banana	cytosol	27.66	24.43
GSMUA_Achr4P07690_001	Banana	cytosol	2.84	7.02
GSMUA_Achr6P24340_001	Banana	cytosol	0.0	0.0
GSMUA_Achr6P24330_001	Banana	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EnsemblPlantsGene:GSMUA_AchrUn_randomG26640_001	EnsemblPlants:GSMUA_AchrUn_randomP26640_001	EnsemblPlants:GSMUA_AchrUn_randomT26640_001	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:M0UCM2	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0002958700	SEG:seg	:	:	:	:

Description

Myrcene synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG26640_001]

Coordinates

chrchrUn_random:-:130662154..130664009

Molecular Weight (calculated)

49380.2 Da

IEP (calculated)

7.115

GRAVY (calculated)

-0.476

Length

423 amino acids

Sequence
(BLAST)

001: MTFCAPTFPC KLIGVHRWTA PSNASPRPCL RPHIRCAAQT PHRRSANYQP SSWSDEYIQS LRNDTKVEED NATRMGKLTE DVKQLIYMKK GIEDQLQLID
101: HLQQLGVAYH FKEDIKDALW TIYRSMEEVN MLLKDNLHAT ALMFRLLREH GFAVSEGVFY RFMDDKGNLK ASLRHQTEGL VSLYEASHLA KEGEHVLEEA
201: TNFTTKQLKS LMEGSLEPHL REHVAHALEL PLNWRMPRLQ TRWFIEASQR EAKMNPLLLE LAKLDFNRVQ NIHQRELREV SRWWSNLGLA QRLPFSRDRL
301: VENYFWTVGL AFEPQFARCR EAQTKANCLI TTIDDVYDVY GTMDELELFT DAVDRWDVNA MGKLPEYMKI CFLALFNTTN DTAYNVMKEK GLDIIPHLKK
401: AWADVCKAHM VEARWYHQGY TPN

Best Arabidopsis Sequence Match ( AT3G25820.2 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW AELCRTYLVE ERGYKRGMQT KLGRIHAKCL DFNC

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.