Factsheet for GSMUA_Achr7P25710_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P25700_001	Banana	plastid	96.2	95.87
GSMUA_AchrUn_...	Banana	plastid	47.15	64.54
GSMUA_Achr7P25720_001	Banana	plastid	64.42	63.76
GSMUA_Achr7P25740_001	Banana	plastid	65.28	63.32
GSMUA_AchrUn_...	Banana	plastid	50.26	62.18
GSMUA_Achr4P07700_001	Banana	plastid	62.18	61.96
GSMUA_Achr4P07680_001	Banana	plastid	58.89	61.89
GSMUA_Achr4P08100_001	Banana	plastid	57.69	60.95
GSMUA_AchrUn_...	Banana	plastid	59.76	59.45
GSMUA_AchrUn_...	Banana	plastid	47.67	57.14
GSMUA_Achr4P08090_001	Banana	plastid	52.68	55.66
GSMUA_Achr4P07690_001	Banana	cytosol	14.85	50.29
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, extracellular	32.64	45.43
GSMUA_Achr11P...	Banana	cytosol	34.2	39.6
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	16.06	37.05
GSMUA_Achr6P24340_001	Banana	cytosol	9.15	35.57
GSMUA_Achr6P24330_001	Banana	cytosol	8.46	34.75
GSMUA_Achr2P03420_001	Banana	cytosol	26.77	32.16
GSMUA_Achr9P21010_001	Banana	cytosol	25.56	30.9

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr7G25710_001	EnsemblPlants:GSMUA_Achr7P25710_001	EnsemblPlants:GSMUA_Achr7T25710_001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	UniProt:M0TKQ7	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002960220	SEG:seg	:	:	:

Description

Putative Myrcene synthase, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_Achr7G25710_001]

Coordinates

chr7:-:27262835..27265739

Molecular Weight (calculated)

66950.0 Da

IEP (calculated)

5.716

GRAVY (calculated)

-0.416

Length

579 amino acids

Sequence
(BLAST)

001: MALLFRAPSF TGNLNALRRT TLSERPSPSI RFSAQAAPTR RTANYQPNLW SDDRIQALTS RSVEEERKTN GIDDLKEDVR KLIYEKKEVE DQLQLVDHLQ
101: QLGVAYHFKD DIDDVLRCLY GSLEDINMLL KDDLHATALG FRLLRENGFD VSEDLFNRFR DEKGDFKASL QHETKGILSL YEASYVAKEG ELVLDQATDF
201: TTKHLKCLME EGSLEPRLRE HVAHALEIPL HWRMQRLHTR WFIEAYQREA TMNPVVLELA KLDFNVVQGM YKGELRELSR WWTNLGLAQK LSFFRDRLTE
301: NFLWTVGSAF EPQFWECREI QTKANCLIAM LDDVYDIYGT LNELELFTEA IERWDANKID KLPDYMKLCF LAIFNAANET GYRVMKEKGL DIIPFLRKAW
401: TDLCKAFLLE AKWYNQGHKP KLDEYLDNAW MSSGGHVFMT NAYCMSDNLT KESLESFSTY PKVARCSAML FRLYNDLATS TIELERGDAP SSIQCYMLES
501: GVPETAARKK IRELIKANWR GINGDRSSSY GEIFKTVAVG LPRMSQFIYQ HGDGYSAPDG ETKKQIMSLL FEPLQLSKL

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.