Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 47.1 | 29.08 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 40.0 | 21.6 |
| CDY68676 | Canola | cytosol | 48.39 | 19.95 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 53.55 | 19.76 |
| CDY18347 | Canola | cytosol | 18.06 | 16.87 |
| CDY67821 | Canola | cytosol | 20.65 | 16.49 |
| CDY13589 | Canola | plastid | 58.06 | 16.16 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 40.0 | 15.98 |
| CDX83558 | Canola | plastid | 59.35 | 15.62 |
| CDY09325 | Canola | plastid | 27.1 | 15.56 |
| CDY12910 | Canola | plastid | 14.84 | 15.44 |
| CDY13587 | Canola | plastid | 58.06 | 15.28 |
| CDX76827 | Canola | plastid | 54.19 | 15.03 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, extracellular | 38.71 | 14.42 |
| CDX90785 | Canola | plastid | 54.19 | 14.17 |
| CDX83208 | Canola | plastid | 53.55 | 13.95 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 60.0 | 13.62 |
| CDY21487 | Canola | plastid | 52.26 | 13.61 |
| CDX83560 | Canola | plastid | 47.74 | 13.1 |
| CDY70719 | Canola | cytosol | 27.74 | 12.36 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 41.29 | 12.33 |
| CDX95273 | Canola | plastid | 31.61 | 11.69 |
| CDX82477 | Canola | plastid | 22.58 | 11.67 |
| CDY61957 | Canola | plastid | 25.81 | 10.58 |
| CDY54750 | Canola | cytosol | 27.1 | 10.47 |
| CDY27296 | Canola | cytosol | 12.26 | 9.74 |
| CDY62515 | Canola | cytosol | 25.16 | 9.73 |
| CDY68962 | Canola | cytosol | 29.68 | 9.13 |
| CDY14933 | Canola | cytosol | 28.39 | 9.02 |
| CDY69236 | Canola | cytosol | 27.74 | 8.88 |
| CDX74453 | Canola | cytosol | 28.39 | 8.29 |
| CDY63249 | Canola | cytosol | 29.03 | 8.09 |
| CDX98661 | Canola | cytosol | 29.03 | 8.08 |
| CDY41707 | Canola | plastid | 29.68 | 7.9 |
| CDY42473 | Canola | cytosol | 28.39 | 7.83 |
| CDY54565 | Canola | plastid | 29.03 | 7.83 |
| CDX76457 | Canola | plastid | 30.32 | 7.82 |
| CDY01639 | Canola | cytosol | 9.68 | 7.77 |
| CDY09324 | Canola | plastid | 29.68 | 7.68 |
| CDX75776 | Canola | plastid | 29.03 | 7.67 |
| CDY13053 | Canola | extracellular | 26.45 | 7.41 |
| CDX82475 | Canola | plastid | 27.74 | 7.4 |
| CDX87217 | Canola | plastid | 27.74 | 7.15 |
| CDX76471 | Canola | plastid | 27.1 | 6.97 |
| CDX82478 | Canola | cytosol | 23.87 | 6.89 |
| CDY49723 | Canola | plastid | 26.45 | 6.88 |
| CDX75775 | Canola | plastid | 21.29 | 6.82 |
| CDX98659 | Canola | plastid | 27.1 | 6.8 |
| CDY02143 | Canola | plastid | 23.87 | 6.69 |
| CDY12909 | Canola | cytosol | 9.68 | 6.47 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 23.23 | 6.44 |
| CDY14934 | Canola | cytosol | 0.65 | 6.25 |
| CDX98470 | Canola | plastid | 23.23 | 6.16 |
| CDY39119 | Canola | plastid | 23.87 | 6.15 |
| CDY06577 | Canola | cytosol | 12.9 | 6.1 |
| CDY32356 | Canola | plastid | 23.23 | 5.81 |
| CDY66920 | Canola | cytosol | 10.97 | 5.14 |
| CDY71184 | Canola | cytosol | 9.03 | 4.19 |
| CDY23121 | Canola | cytosol | 6.45 | 2.63 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 3.87 | 1.57 |
| CDY53648 | Canola | cytosol | 1.29 | 0.78 |
| CDY53129 | Canola | cytosol | 1.29 | 0.78 |
| CDX95274 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:50.4.2 | GO:A0A078FSJ9 | UniProt:A0A078FSJ9 | EnsemblPlants:CDY15827 |
| ProteinID:CDY15827 | ProteinID:CDY15827.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00090160001 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0004EEE5C4 | : | : | : | : | : |
Description
BnaC02g34460DBnaC02g34460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FSJ9]
Coordinates
chrLK032058:+:672988..673813
Molecular Weight (calculated)
18858.0 Da
IEP (calculated)
4.854
GRAVY (calculated)
-0.740
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDVDTKSSS RLEQLELIDD LENLRVSYHF EVEINNILND FYHKIVWKCE YEEGLHATTL GFQLLRQHGF NVSEEKFVDG GETCNAEVRE NEIHALEMPY
101: HWRMRRLEAR WYIDAYKKKH DKNIDLFEFP KIDFNFLQSY HQEELKHVSS WWEET
101: HWRMRRLEAR WYIDAYKKKH DKNIDLFEFP KIDFNFLQSY HQEELKHVSS WWEET
001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG
Arabidopsis Description
TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.