CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61957	Canola	plastid	85.91	33.86
Bra027079.1-P	Field mustard	plastid	40.94	18.32
CDY15827	Canola	cytosol	15.44	14.84
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	20.13	11.95
CDX82477	Canola	plastid	19.46	9.67
CDY68788	Canola	endoplasmic reticulum, golgi	26.17	9.29
CDY67821	Canola	cytosol	12.08	9.28
CDY09325	Canola	plastid	15.44	8.52
VIT_13s0067g03830.t01	Wine grape	plastid	24.83	8.41
CDY68676	Canola	cytosol	20.13	7.98
CDY01639	Canola	cytosol	10.07	7.77
CDX95273	Canola	plastid	20.81	7.4
CDY18347	Canola	cytosol	8.05	7.23
CDY13589	Canola	plastid	26.17	7.0
VIT_00s0724g00010.t01	Wine grape	cytosol	18.79	6.56
VIT_13s0067g00130.t01	Wine grape	plastid	22.82	6.53
CDX76827	Canola	plastid	24.16	6.44
CDX90785	Canola	plastid	25.5	6.41
CDX75775	Canola	plastid	20.81	6.4
CDY14934	Canola	cytosol	0.67	6.25
VIT_13s0019g00060.t01	Wine grape	plastid	24.83	6.23
CDX83208	Canola	plastid	24.83	6.22
CDY21487	Canola	plastid	24.83	6.22
VIT_13s0067g03790.t01	Wine grape	plastid	24.16	6.07
CDX83558	Canola	plastid	23.49	5.94
CDY13587	Canola	plastid	22.82	5.77
VIT_13s0067g00370.t01	Wine grape	plastid	22.82	5.76
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	26.17	5.71
Solyc02g079840.1.1	Tomato	cytosol	20.13	5.58
CDY41707	Canola	plastid	21.48	5.5
CDX83560	Canola	plastid	20.13	5.31
VIT_13s0084g00010.t01	Wine grape	cytosol	19.46	5.26
CDX82475	Canola	plastid	20.13	5.16
CDY54565	Canola	plastid	19.46	5.04
CDY70719	Canola	cytosol	11.41	4.89
CDX75776	Canola	plastid	18.79	4.77
CDY14933	Canola	cytosol	15.44	4.71
CDX98659	Canola	plastid	19.46	4.69
CDY42473	Canola	cytosol	17.45	4.63
CDX76457	Canola	plastid	18.12	4.49
CDY39124	Canola	cytoskeleton, cytosol, plastid	16.78	4.47
VIT_13s0067g03700.t01	Wine grape	cytosol	16.78	4.42
CDY49723	Canola	plastid	17.45	4.36
CDY39119	Canola	plastid	17.45	4.32
CDY63249	Canola	cytosol	16.11	4.32
CDY09324	Canola	plastid	16.78	4.17
CDY02143	Canola	plastid	15.44	4.16
CDX74453	Canola	cytosol	14.77	4.14
CDX98470	Canola	plastid	16.11	4.11
CDX82478	Canola	cytosol	14.77	4.1
CDY32356	Canola	plastid	16.78	4.03
CDX87217	Canola	plastid	16.11	3.99
CDY68962	Canola	cytosol	13.42	3.97
CDY69236	Canola	cytosol	12.75	3.93
CDX76471	Canola	plastid	15.44	3.81
CDY13053	Canola	extracellular	13.42	3.62
CDX98661	Canola	cytosol	13.42	3.59
CDY27296	Canola	cytosol	4.7	3.59
PGSC0003DMT400055897	Potato	cytosol	2.01	2.48
PGSC0003DMT400089009	Potato	cytosol	1.34	1.24
CDY23121	Canola	cytosol	2.68	1.05
VIT_00s2271g00010.t01	Wine grape	cytosol	2.68	1.01
CDY12909	Canola	cytosol	1.34	0.86
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	2.01	0.79
GSMUA_Achr4P07690_001	Banana	cytosol	0.67	0.58
KRH22502	Soybean	cytosol	0.67	0.57
VIT_13s0067g03740.t01	Wine grape	cytosol	0.67	0.24
CDY53129	Canola	cytosol	0.0	0.0
CDY06577	Canola	cytosol	0.0	0.0
VIT_13s0067g00090.t01	Wine grape	cytosol	0.0	0.0
CDX95274	Canola	cytosol	0.0	0.0
VIT_13s0067g00300.t01	Wine grape	cytosol	0.0	0.0
VIT_13s0067g00320.t01	Wine grape	cytosol	0.0	0.0
CDY71184	Canola	cytosol	0.0	0.0
CDY66920	Canola	cytosol	0.0	0.0
VIT_13s0067g03770.t01	Wine grape	cytosol	0.0	0.0
CDY62515	Canola	cytosol	0.0	0.0
CDY54750	Canola	cytosol	0.0	0.0
CDY53648	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.50.10.130	MapMan:50.4.2	GO:A0A078FEV1	UniProt:A0A078FEV1	EnsemblPlants:CDY12910	ProteinID:CDY12910
ProteinID:CDY12910.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00070581001	InterPro:IPR036965	PFAM:PF01397	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EF302C	:

Description

BnaA09g13640DBnaA09g13640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FEV1]

Coordinates

chrLK032028:-:346471..347152

Molecular Weight (calculated)

17121.6 Da

IEP (calculated)

9.498

GRAVY (calculated)

-0.283

Length

149 amino acids

Sequence
(BLAST)

001: MALINSKICP LSCFASTNPN SLPKFLVSKF HGTVDSSSPA NTTKRSSPSN FNLPVSNYLR RFDHKISIVY MIDNIQGLGI DFHFLHEIDQ ILHIVYKGFN
101: QNNGCYDRDL REVALCFRLL RQEGHNVQES IFRNILDKKS GFKTTYKMM

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.