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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • cytosol 1
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, endoplasmic reticulum, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:plastid
WoLF PSORT:plastid
YLoc:endoplasmic reticulum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020953.1-P Field mustard plastid 87.65 86.07
CDY09325 Canola plastid 38.56 85.56
CDX76471 Canola plastid 83.14 82.59
AT1G66020.1 Thale cress plastid 64.44 64.55
AT4G20200.1 Thale cress plastid 64.77 64.24
CDY14934 Canola cytosol 1.67 62.5
CDX76457 Canola plastid 62.27 62.06
CDX98659 Canola plastid 63.94 61.97
CDY01639 Canola cytosol 19.7 61.14
CDY18347 Canola cytosol 16.53 59.64
CDY54565 Canola plastid 55.76 58.09
CDY68962 Canola cytosol 47.08 55.95
CDY70719 Canola cytosol 32.22 55.46
CDY69236 Canola cytosol 44.24 54.75
CDX98661 Canola cytosol 50.75 54.58
CDY49723 Canola plastid 53.59 53.86
CDX95273 Canola plastid 37.4 53.46
CDY13053 Canola extracellular 46.58 50.45
CDY41707 Canola plastid 48.91 50.34
CDY42473 Canola cytosol 45.41 48.4
CDY23121 Canola cytosol 30.38 47.89
CDX74453 Canola cytosol 39.9 45.01
CDY63249 Canola cytosol 41.4 44.6
CDY14933 Canola cytosol 35.89 44.06
CDX95274 Canola cytosol 9.35 42.11
VIT_18s0001g04200.t01 Wine grape cytosol 8.35 42.02
CDY67821 Canola cytosol 13.36 41.24
CDY71184 Canola cytosol 22.87 41.02
PGSC0003DMT400050941 Potato cytosol 16.36 39.2
CDY27296 Canola cytosol 12.35 37.95
CDX82478 Canola cytosol 33.89 37.8
CDX82477 Canola plastid 18.2 36.33
CDX75776 Canola plastid 35.56 36.29
CDY06577 Canola cytosol 19.87 36.28
CDY39124 Canola cytoskeleton, cytosol, plastid 33.72 36.14
PGSC0003DMT400075074 Potato cytosol 12.35 35.58
CDX87217 Canola plastid 35.06 34.94
CDX82475 Canola plastid 33.72 34.77
CDX98470 Canola plastid 33.56 34.42
CDY39119 Canola plastid 34.56 34.39
CDY02143 Canola plastid 31.39 34.0
CDY32356 Canola plastid 33.89 32.74
Solyc01g101220.1.1 Tomato cytosol 9.02 32.14
Solyc01g101190.2.1 Tomato cytosol 29.22 31.7
PGSC0003DMT400070310 Potato cytosol 16.36 31.51
PGSC0003DMT400047124 Potato cytosol 15.69 30.23
PGSC0003DMT400079785 Potato cytosol 15.69 30.23
CDX75774 Canola cytosol, golgi, mitochondrion, plasma membrane 19.03 29.92
CDY15827 Canola cytosol 7.68 29.68
VIT_18s0001g05460.t01 Wine grape cytosol, mitochondrion 14.52 28.06
VIT_18s0001g04510.t01 Wine grape plastid 14.02 27.45
CDY66920 Canola cytosol 14.69 26.59
CDX76827 Canola plastid 24.54 26.3
Os02t0458100-01 Rice plastid 16.86 25.83
CDX75775 Canola plastid 20.87 25.83
CDX83560 Canola plastid 23.87 25.31
CDY13587 Canola plastid 24.87 25.3
CDX83558 Canola plastid 24.54 24.96
CDY62515 Canola cytosol 16.69 24.94
CDY68676 Canola cytosol 15.53 24.73
CDY72187 Canola cytosol, mitochondrion, nucleus, plastid 10.35 24.7
CDY54750 Canola cytosol 16.36 24.44
CDX90785 Canola plastid 23.87 24.11
CDY13589 Canola plastid 22.2 23.88
CDY21487 Canola plastid 23.37 23.53
CDX83208 Canola plastid 23.21 23.36
GSMUA_Achr6P24340_001 Banana cytosol 5.68 22.82
GSMUA_Achr6P24330_001 Banana cytosol 5.34 22.7
KRG93110 Soybean mitochondrion 11.19 22.64
CDY13590 Canola endoplasmic reticulum, extracellular, plastid 25.21 22.11
CDY53129 Canola cytosol 9.02 21.09
CDY53648 Canola cytosol 9.02 21.09
VIT_18s0001g05430.t01 Wine grape cytosol 16.86 20.95
CDY12909 Canola cytosol 7.85 20.26
CDY68788 Canola endoplasmic reticulum, golgi 14.02 20.0
CDY12910 Canola plastid 4.17 16.78
CDY61957 Canola plastid 10.52 16.67
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130MapMan:9.1.4.2GO:A0A078F8G1UniProt:A0A078F8G1EnsemblPlants:CDY09324
ProteinID:CDY09324ProteinID:CDY09324.1GO:GO:0000287GO:GO:0003674GO:GO:0003824GO:GO:0005488
GO:GO:0008150GO:GO:0008152GO:GO:0010333GO:GO:0016829GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00001651001
InterPro:IPR008949InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sfPFAM:PF01397PFAM:PF03936PANTHER:PTHR31225
PANTHER:PTHR31225:SF25SUPFAM:SSF48239SUPFAM:SSF48576InterPro:Terpene_cyclase_like_1_CInterPro:Terpene_synth_NInterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bdInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI0004EEA926SEG:seg::
Description
BnaC03g63540DBnaC03g63540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F8G1]
Coordinates
chrLK031994:+:887029..890473
Molecular Weight (calculated)
69437.7 Da
IEP (calculated)
6.518
GRAVY (calculated)
-0.266
Length
599 amino acids
Sequence
(BLAST)
001: MATTAVFGPK LGFHLSLPCR NSLFLPPIIK LYGFPVTSFP DKRTKHVRLK ATTCDGQLSN RQFKELPPSE WTHHFHSVTL DVSEMDGLKR EIDTLKPKVK
101: NVFMSSQGTE RILMIYLLVS LGLAYHFEDE MYDTLKESFT KIEEMMDNEE DLYKVSIIFW VFRTYGHHIS SDVFTRFKES NGDFKETLKD DPRGILSLYE
201: AAHLRTTKDY ILNEALSFTS SHLESLIAGG TCPPHLSMHI QNALYLSQRW NMEMLVAVKY ISFYEQEEDH DEMLLKFAKI SFKLLQLQHI QDLKILTNWF
301: KEVDTGSKLP PYFRHRIVES YFLVQAVFSD PQLSRARITL TQYYTILTLI DDTFDRYASL PEAEILASSL ERWTYDPAMD KQPEYLKAIL NFILDTFEDF
401: EKELRPGGKP YSLEANIEEF KANVKANFEH AKWAHAAHLP SFEEYMEVAE VVIGVYVILA GYFICLGKMA TKEAYEWLKS RPRLVKSISV RGRLMNDITG
501: LEDDMRRGQI TNAVNCYMKQ YGVSKQDALR ELRKMVADTD NIINEELLKT TRLSRLVLKT ATGVAQSITV CYYGYEGFTR PEGKMKEYMT SLFVDQIRL
Best Arabidopsis Sequence Match ( AT4G20200.1 )
(BLAST)
001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI
Arabidopsis Description
TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.