Factsheet for AT1G66020.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G20200.1	Thale cress	plastid	73.41	72.68
AT4G20230.2	Thale cress	plastid	70.23	67.85
Bra012515.1-P	Field mustard	extracellular	27.93	67.61
CDX98659	Canola	plastid	67.89	65.7
CDX76471	Canola	plastid	66.22	65.67
AT3G29190.1	Thale cress	plastid	65.22	64.89
CDY09324	Canola	plastid	64.55	64.44
Bra020953.1-P	Field mustard	plastid	65.05	63.77
CDY09325	Canola	plastid	28.26	62.59
AT4G20210.1	Thale cress	plastid	60.2	60.0
AT3G29110.1	Thale cress	plastid	55.85	56.13
AT1G48800.1	Thale cress	mitochondrion, plastid	54.52	54.06
AT1G48820.1	Thale cress	mitochondrion, plastid	49.5	52.76
AT4G15870.1	Thale cress	plastid	49.33	49.33
AT4G13280.2	Thale cress	cytosol	43.48	46.93
AT5G44630.1	Thale cress	cytosol	43.48	46.68
AT4G13300.1	Thale cress	cytosol	42.64	46.03
AT2G23230.2	Thale cress	plastid	44.82	43.86
AT1G70080.1	Thale cress	mitochondrion	43.31	42.39
AT5G48110.1	Thale cress	plastid	23.41	41.3
AT3G14490.1	Thale cress	plastid	40.13	39.93
VIT_18s0001g04200.t01	Wine grape	cytosol	7.53	37.82
AT3G14520.1	Thale cress	plastid	38.13	37.69
PGSC0003DMT400050941	Potato	cytosol	15.55	37.2
AT1G33750.1	Thale cress	mitochondrion, plastid	37.46	37.15
AT3G14540.1	Thale cress	plastid	37.29	37.04
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	37.63	37.01
AT3G32030.1	Thale cress	plastid	37.29	36.92
AT3G29410.1	Thale cress	plastid	37.12	36.82
PGSC0003DMT400075074	Potato	cytosol	12.37	35.58
PGSC0003DMT400070310	Potato	cytosol	15.89	30.55
Solyc01g101190.2.1	Tomato	cytosol	28.09	30.43
PGSC0003DMT400079785	Potato	cytosol	15.72	30.23
Solyc01g101220.1.1	Tomato	cytosol	8.36	29.76
PGSC0003DMT400047124	Potato	cytosol	15.05	28.94
Os02t0458100-01	Rice	plastid	17.89	27.37
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.71	26.45
VIT_18s0001g04510.t01	Wine grape	plastid	13.38	26.14
AT3G25820.1	Thale cress	plastid	24.08	24.0
AT3G25830.1	Thale cress	plastid	24.08	24.0
AT4G16730.1	Thale cress	cytosol	21.57	23.93
AT2G24210.1	Thale cress	plastid	23.58	23.86
AT4G16740.1	Thale cress	mitochondrion	22.41	23.72
AT3G25810.1	Thale cress	plastid	23.58	23.58
KRG93110	Soybean	mitochondrion	11.2	22.64
AT1G61680.1	Thale cress	plastid	20.23	21.27
GSMUA_Achr6P24330_001	Banana	cytosol	4.85	20.57
VIT_18s0001g05430.t01	Wine grape	cytosol	16.22	20.12
GSMUA_Achr6P24340_001	Banana	cytosol	4.68	18.79

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:842915	MapMan:9.1.4.2	ProteinID:AAG51300.1	ProteinID:AEE34452.1
EMBL:AK117510	ArrayExpress:AT1G66020	EnsemblPlantsGene:AT1G66020	RefSeq:AT1G66020	TAIR:AT1G66020	RefSeq:AT1G66020-TAIR-G
EnsemblPlants:AT1G66020.1	TAIR:AT1G66020.1	Unigene:At.35813	EMBL:BT005423	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006629	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333
GO:GO:0016114	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
RefSeq:NP_176776.1	PFAM:PF01397	PFAM:PF03936	PO:PO:0000230	PO:PO:0007611	PO:PO:0009005
PO:PO:0009046	PO:PO:0020100	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4	UniProt:Q9C8E3	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000000C648	SEG:seg	:	:	:	:

Description

TPS26Terpenoid synthase 26 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8E3]

Coordinates

chr1:+:24577544..24580185

Molecular Weight (calculated)

69348.4 Da

IEP (calculated)

6.181

GRAVY (calculated)

-0.224

Length

598 amino acids

Sequence
(BLAST)

001: MEAKFGSQIS LHFRTNSFPL RKLYGFPLTT FSGTSLNHLR LKATNTLKGD DQESIRKFKK LPTSEWTHYF HSFVVDVSEM DALRNEIDAL KPKVKNTIMS
101: SQGIDSTKKR ILMIYMLVSL GLAHHFEEEI YETLRDGFGK IEEMMEDEDD LCTVSIIFWA FRRYGHYISS DVFRRFKGSN GNFKESLTGY AKGMLSLYEA
201: AHLGTTKDYI LQEALSFTSS HLESLAACGT CPPHLSVHIQ NVLSVPQHWN MEILVPVEYI PFYEQEKDHD EILLKFAKLS FKLLQLQYIQ DLKIVTKWYK
301: ELEFASKLPP YFRDNIVVNY FYVLAVIYTP QHSYERIMLT QYFTCLAILD DTFDRYASLP EAISLANSLE RWAPNDAMDK QPDYLKIVLN FILKTFEVFQ
401: KELEPEGRSY TVKATIEEFK TVTKGNFDLA KWAHAVHVPS FEEYMEVGEE EISVCSTLAG IFMCMEQKAT KEDYEWLKSR PKFIQTLCAR CRLKNDITGF
501: EDDMSRGYVT NAVNCYMKQY GVTKQEAFGE LNKIIVEADK ILNEEFLTTV GVRHCVLKAT FDLARMIFIT YNGYEGFTYP QGKIKEYMTS LFVDRIGL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.