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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 3
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:plastid
MultiLoc:plastid
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G25830.1 Thale cress plastid 100.0 100.0
CDX83560 Canola plastid 74.17 78.76
AT3G25810.1 Thale cress plastid 78.0 78.26
CDY13589 Canola plastid 70.83 76.3
CDY13590 Canola endoplasmic reticulum, extracellular, plastid 75.83 66.62
AT2G24210.1 Thale cress plastid 63.33 64.3
VIT_13s0067g03770.t01 Wine grape cytosol 34.0 58.79
AT4G16740.1 Thale cress mitochondrion 53.83 57.17
VIT_13s0067g00300.t01 Wine grape cytosol 14.67 55.7
VIT_13s0067g00090.t01 Wine grape cytosol 31.83 54.57
AT4G16730.1 Thale cress cytosol 48.83 54.36
VIT_13s0067g00320.t01 Wine grape cytosol 10.5 53.39
VIT_00s0724g00010.t01 Wine grape cytosol 35.83 50.35
VIT_00s2271g00010.t01 Wine grape cytosol 33.0 50.13
VIT_13s0067g03700.t01 Wine grape cytosol 46.83 49.65
VIT_13s0067g03740.t01 Wine grape cytosol 34.5 49.05
VIT_13s0084g00010.t01 Wine grape cytosol 44.5 48.46
GSMUA_Achr4P07690_001 Banana cytosol 13.5 47.37
Solyc02g079840.1.1 Tomato cytosol 42.0 46.84
PGSC0003DMT400089009 Potato cytosol 12.33 45.96
VIT_13s0067g00130.t01 Wine grape plastid 39.0 44.91
VIT_13s0067g00370.t01 Wine grape plastid 44.0 44.75
VIT_13s0067g03790.t01 Wine grape plastid 43.0 43.51
VIT_13s0019g00060.t01 Wine grape plastid 43.0 43.43
PGSC0003DMT400055897 Potato cytosol 8.67 42.98
Bra025164.1-P Field mustard cytosol 75.83 42.84
VIT_13s0067g03830.t01 Wine grape plastid 28.83 39.32
KRH22502 Soybean cytosol 9.0 30.86
AT1G61680.1 Thale cress plastid 27.83 29.35
AT5G48110.1 Thale cress plastid 14.83 26.25
AT1G70080.1 Thale cress mitochondrion 26.17 25.7
AT3G14490.1 Thale cress plastid 25.67 25.62
AT3G14520.1 Thale cress plastid 25.33 25.12
AT3G29410.1 Thale cress plastid 24.67 24.54
AT1G48820.1 Thale cress mitochondrion, plastid 22.83 24.42
AT5G44630.1 Thale cress cytosol 22.67 24.42
AT2G23230.2 Thale cress plastid 24.67 24.22
AT3G32030.1 Thale cress plastid 24.33 24.17
AT3G14540.1 Thale cress plastid 24.17 24.09
AT1G66020.1 Thale cress plastid 24.0 24.08
AT1G33750.1 Thale cress mitochondrion, plastid 24.17 24.05
AT3G29190.1 Thale cress plastid 24.0 23.96
AT4G13300.1 Thale cress cytosol 22.0 23.83
AT4G15870.1 Thale cress plastid 23.67 23.75
AT4G13280.2 Thale cress cytosol 21.83 23.65
AT4G20200.1 Thale cress plastid 23.67 23.51
AT1G31950.3 Thale cress cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole 23.17 22.86
AT4G20230.2 Thale cress plastid 23.5 22.78
AT3G29110.1 Thale cress plastid 22.5 22.69
AT4G20210.1 Thale cress plastid 22.33 22.33
AT1G48800.1 Thale cress mitochondrion, plastid 22.33 22.22
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130EntrezGene:822175EntrezGene:822177MapMan:9.1.4.2ProteinID:AEE77073.1
ProteinID:AEE77075.1EMBL:AK229712EMBL:AK319171ProteinID:ANM64839.1ProteinID:ANM64840.1ArrayExpress:AT3G25820
EnsemblPlantsGene:AT3G25820RefSeq:AT3G25820TAIR:AT3G25820RefSeq:AT3G25820-TAIR-GEnsemblPlants:AT3G25820.1TAIR:AT3G25820.1
Symbol:ATTPS-CINEMBL:AY691947ProteinID:BAB01180.1ProteinID:BAB01181.1GO:GO:0000287GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006629GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009507GO:GO:0009536
GO:GO:0009987GO:GO:0010333GO:GO:0016114GO:GO:0016829GO:GO:0046872GO:GO:0102313
InterPro:IPR008949InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sfRefSeq:NP_001326843.1RefSeq:NP_001326844.1RefSeq:NP_189210.2
RefSeq:NP_189212.1UniProt:P0DI76UniProt:P0DI77PFAM:PF01397PFAM:PF03936PO:PO:0001016
PO:PO:0025281PANTHER:PTHR31225PANTHER:PTHR31225:SF16SUPFAM:SSF48239SUPFAM:SSF48576Symbol:TPS-CIN
InterPro:Terpene_cyclase_like_1_CInterPro:Terpene_synth_NInterPro:Terpene_synth_N_sfInterPro:Terpene_synthase_metal-bdInterPro:Terpenoid_cyclase/PrenylTrfaseUniParc:UPI0000048783
Description
TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
Coordinates
chr3:+:9439146..9442774
Molecular Weight (calculated)
70458.4 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.435
Length
600 amino acids
Sequence
(BLAST)
001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.