Factsheet for AT4G20210.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012513.1-P	Field mustard	cytosol	49.0	61.89
CDY68962	Canola	cytosol	51.67	61.51
CDY70719	Canola	cytosol	35.5	61.21
AT4G20200.1	Thale cress	plastid	61.17	60.76
CDY69236	Canola	cytosol	48.67	60.33
AT1G66020.1	Thale cress	plastid	60.0	60.2
CDX98661	Canola	cytosol	54.83	59.07
AT3G29190.1	Thale cress	plastid	57.5	57.4
AT4G20230.2	Thale cress	plastid	58.0	56.22
AT3G29110.1	Thale cress	plastid	55.33	55.8
AT1G48800.1	Thale cress	mitochondrion, plastid	52.67	52.4
AT1G48820.1	Thale cress	mitochondrion, plastid	48.5	51.87
AT4G15870.1	Thale cress	plastid	49.67	49.83
AT5G44630.1	Thale cress	cytosol	45.17	48.65
AT2G23230.2	Thale cress	plastid	46.17	45.34
AT4G13300.1	Thale cress	cytosol	41.67	45.13
AT4G13280.2	Thale cress	cytosol	41.5	44.95
AT5G48110.1	Thale cress	plastid	23.17	41.0
VIT_18s0001g04200.t01	Wine grape	cytosol	7.83	39.5
AT1G70080.1	Thale cress	mitochondrion	40.17	39.44
AT3G14490.1	Thale cress	plastid	37.67	37.6
PGSC0003DMT400050941	Potato	cytosol	15.67	37.6
AT3G32030.1	Thale cress	plastid	37.67	37.42
AT3G14520.1	Thale cress	plastid	37.17	36.86
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	37.17	36.68
AT3G14540.1	Thale cress	plastid	36.33	36.21
AT1G33750.1	Thale cress	mitochondrion, plastid	36.33	36.15
PGSC0003DMT400075074	Potato	cytosol	12.5	36.06
AT3G29410.1	Thale cress	plastid	35.83	35.66
PGSC0003DMT400047124	Potato	cytosol	16.17	31.19
PGSC0003DMT400070310	Potato	cytosol	16.0	30.87
Solyc01g101190.2.1	Tomato	cytosol	28.17	30.62
Solyc01g101220.1.1	Tomato	cytosol	8.5	30.36
PGSC0003DMT400079785	Potato	cytosol	14.67	28.3
VIT_18s0001g04510.t01	Wine grape	plastid	14.17	27.78
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.17	27.42
Os02t0458100-01	Rice	plastid	16.83	25.83
AT4G16730.1	Thale cress	cytosol	22.5	25.05
AT3G25810.1	Thale cress	plastid	23.5	23.58
AT2G24210.1	Thale cress	plastid	23.17	23.52
AT4G16740.1	Thale cress	mitochondrion	21.5	22.83
AT3G25820.1	Thale cress	plastid	22.33	22.33
AT3G25830.1	Thale cress	plastid	22.33	22.33
GSMUA_Achr6P24340_001	Banana	cytosol	5.5	22.15
GSMUA_Achr6P24330_001	Banana	cytosol	5.17	21.99
AT1G61680.1	Thale cress	plastid	20.67	21.79
KRG93110	Soybean	mitochondrion	10.33	20.95
VIT_18s0001g05430.t01	Wine grape	cytosol	16.17	20.12

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:827768	MapMan:9.1.4.2	ProteinID:AEE84285.1	ArrayExpress:AT4G20210
EnsemblPlantsGene:AT4G20210	RefSeq:AT4G20210	TAIR:AT4G20210	RefSeq:AT4G20210-TAIR-G	EnsemblPlants:AT4G20210.1	TAIR:AT4G20210.1
ProteinID:CAA18246.1	ProteinID:CAB79021.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009536	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_193754.2
UniProt:O65435	PFAM:PF01397	PFAM:PF03936	PO:PO:0009005	PANTHER:PTHR31045	PANTHER:PTHR31045:SF4
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000034F0C2	SEG:seg	:	:	:	:

Description

TPS08Terpenoid synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:O65435]

Coordinates

chr4:-:10913470..10918371

Molecular Weight (calculated)

69098.4 Da

IEP (calculated)

6.565

GRAVY (calculated)

-0.267

Length

600 amino acids

Sequence
(BLAST)

001: MEAIKTFSPK FGFQISLSPR THLTPVRFPP TACPVKPANL VRLKATRALI RDPQESNRKF QKFPPSEWTN RFDSVSVDAS EMDALRKEID KIIPNVKKEL
101: MSSQGIESTK KKILMVYLLV SLGLAYHFED EIEECLKEGF ETIEEMMAGE DNLYTISIIF LVLRTYGHHM SSDIFQKFKG NDGNFKGCIS GDAKGLLALY
201: EAAQLRTTTE YIMEEALSFT SSNLELLAAD GRCPPHLSKH IRNALGLSQH KQMEVLVAVE YISFYEQEKD HDKILLKFAK LNFKLMQLHY LEELKVVTKW
301: YKEHDFASNL PPYFKYVIVE NHFFAITMYF EPKFSQKRIM LAKYFTVLVL LDDTCDRYAS LSEAESLTNS LERWAPDDAM DKQPHYLKFV FKFIMGCFEE
401: FERELASEGR SYSVKATLEE FKTIVKANFD FAKLAHTGHV PSFKEYMEVG EVEVGVCATL AGNLMCIGHI GDEGVYEWLK SRPKFLKAAS TYGRLMNDIA
501: GFEDDMKREY VITGVNTYMK QYGLTKMEAI RELQNLVEYN HTIMNEEFLK TTDLPRQIRK QVINVARSLN VSYTEGEGFT HTKGKVDEYI TSLFITPIRI

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.