Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13053 | Canola | extracellular | 69.16 | 70.16 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 74.33 | 69.15 |
| Bra027609.1-P | Field mustard | cytosol | 35.12 | 68.4 |
| CDY23121 | Canola | cytosol | 44.21 | 65.26 |
| AT3G29110.1 | Thale cress | plastid | 53.3 | 50.25 |
| AT4G20200.1 | Thale cress | plastid | 53.48 | 49.67 |
| AT1G66020.1 | Thale cress | plastid | 52.76 | 49.5 |
| AT4G20210.1 | Thale cress | plastid | 51.87 | 48.5 |
| AT4G20230.2 | Thale cress | plastid | 53.3 | 48.3 |
| AT3G29190.1 | Thale cress | plastid | 51.16 | 47.75 |
| AT4G15870.1 | Thale cress | plastid | 49.55 | 46.49 |
| AT5G44630.1 | Thale cress | cytosol | 43.67 | 43.99 |
| AT2G23230.2 | Thale cress | plastid | 46.17 | 42.39 |
| AT4G13300.1 | Thale cress | cytosol | 39.93 | 40.43 |
| AT4G13280.2 | Thale cress | cytosol | 39.57 | 40.07 |
| AT1G70080.1 | Thale cress | mitochondrion | 43.32 | 39.77 |
| AT5G48110.1 | Thale cress | plastid | 22.64 | 37.46 |
| PGSC0003DMT400050941 | Potato | cytosol | 16.58 | 37.2 |
| PGSC0003DMT400075074 | Potato | cytosol | 13.73 | 37.02 |
| AT3G14490.1 | Thale cress | plastid | 38.15 | 35.61 |
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 37.79 | 35.16 |
| AT3G14520.1 | Thale cress | plastid | 37.25 | 34.55 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 7.31 | 34.45 |
| AT3G32030.1 | Thale cress | plastid | 36.54 | 33.94 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 36.72 | 33.88 |
| AT3G14540.1 | Thale cress | plastid | 35.65 | 33.22 |
| AT3G29410.1 | Thale cress | plastid | 35.65 | 33.17 |
| PGSC0003DMT400070310 | Potato | cytosol | 17.65 | 31.83 |
| Solyc01g101220.1.1 | Tomato | cytosol | 9.27 | 30.95 |
| PGSC0003DMT400079785 | Potato | cytosol | 17.11 | 30.87 |
| Solyc01g101190.2.1 | Tomato | cytosol | 30.3 | 30.8 |
| PGSC0003DMT400047124 | Potato | cytosol | 16.93 | 30.55 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 15.15 | 27.78 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 15.15 | 27.42 |
| Os02t0458100-01 | Rice | plastid | 18.89 | 27.11 |
| AT4G16740.1 | Thale cress | mitochondrion | 23.35 | 23.19 |
| AT2G24210.1 | Thale cress | plastid | 24.06 | 22.84 |
| AT3G25820.1 | Thale cress | plastid | 24.42 | 22.83 |
| AT3G25830.1 | Thale cress | plastid | 24.42 | 22.83 |
| AT4G16730.1 | Thale cress | cytosol | 21.21 | 22.08 |
| AT3G25810.1 | Thale cress | plastid | 23.35 | 21.91 |
| KRG93110 | Soybean | mitochondrion | 10.87 | 20.61 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 5.17 | 20.57 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 5.35 | 20.13 |
| AT1G61680.1 | Thale cress | plastid | 20.14 | 19.86 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 16.22 | 18.88 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:841304 | MapMan:9.1.4.2 | ProteinID:AAG60130.1 | ProteinID:AEE32352.1 |
| ArrayExpress:AT1G48820 | EnsemblPlantsGene:AT1G48820 | RefSeq:AT1G48820 | TAIR:AT1G48820 | RefSeq:AT1G48820-TAIR-G | EnsemblPlants:AT1G48820.1 |
| TAIR:AT1G48820.1 | Unigene:At.52082 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016740 | GO:GO:0016829 | GO:GO:0046872 |
| InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | RefSeq:NP_175313.1 | PFAM:PF01397 | PFAM:PF03936 |
| PO:PO:0001081 | PO:PO:0007611 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0025022 | PANTHER:PTHR31225 |
| PANTHER:PTHR31225:SF22 | UniProt:Q9C749 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N |
| InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000004835B | SEG:seg | : |
Description
Terpene cyclase, putative [Source:UniProtKB/TrEMBL;Acc:Q9C749]
Coordinates
chr1:+:18055229..18059521
Molecular Weight (calculated)
64880.1 Da
IEP (calculated)
6.147
GRAVY (calculated)
-0.331
Length
561 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAIRVFGLK LGSKLSIHSQ TNAFPAFKLS RFPLTSFPGK HAHLDPLKAT THPLAFDGEE NNREFKNLGP SEWGHQFLSA HVDLSEMDAL EREIEALKPK
101: VRDMLISSES SKKKILFLYL LVSLGLAYHF EDEIKESLED GLQKIEEMMA SEDDLRFKGD NGKFKECLAK DAKGILSLYE AAHMGTTTDY ILDEALSFTL
201: TYMESLAASG TCKINLSRRI RKALDQPQHK NMEIIVAMKY IQFYEEEEDC DKTLLKFAKL NFKFLQLHYL QELKILSKWY KDQDFKSKLP PYFRDRLVEC
301: HFASLTCFEP KYARARIFLS KIFTVQIFID DTCDRYASLG EVESLADTIE RWDPDDHAMD GLPDYLKSVV KFVFNTFQEF ERKCKRSLRI NLQVAKWVKA
401: GHLPSFDEYL DVAGLELAIS FTFAGILMGM ENVCKPEAYE WLKSRDKLVR GVITKVRLLN DIFGYEDDMR RGYVTNSINC YKKQYGVTEE EAIRKLHQIV
501: ADGEKMMNEE FLKPINVPYQ VPKVVILDTL RAANVSYEKD DEFTRPGEHL KNCITSIYFD L
101: VRDMLISSES SKKKILFLYL LVSLGLAYHF EDEIKESLED GLQKIEEMMA SEDDLRFKGD NGKFKECLAK DAKGILSLYE AAHMGTTTDY ILDEALSFTL
201: TYMESLAASG TCKINLSRRI RKALDQPQHK NMEIIVAMKY IQFYEEEEDC DKTLLKFAKL NFKFLQLHYL QELKILSKWY KDQDFKSKLP PYFRDRLVEC
301: HFASLTCFEP KYARARIFLS KIFTVQIFID DTCDRYASLG EVESLADTIE RWDPDDHAMD GLPDYLKSVV KFVFNTFQEF ERKCKRSLRI NLQVAKWVKA
401: GHLPSFDEYL DVAGLELAIS FTFAGILMGM ENVCKPEAYE WLKSRDKLVR GVITKVRLLN DIFGYEDDMR RGYVTNSINC YKKQYGVTEE EAIRKLHQIV
501: ADGEKMMNEE FLKPINVPYQ VPKVVILDTL RAANVSYEKD DEFTRPGEHL KNCITSIYFD L
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.