Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY54750 | Canola | cytosol | 61.97 | 83.29 |
| CDY62515 | Canola | cytosol | 61.22 | 82.29 |
| Bra038504.1-P | Field mustard | plastid | 72.17 | 72.44 |
| AT4G16740.1 | Thale cress | mitochondrion | 59.18 | 56.46 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 15.58 | 53.16 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 31.73 | 48.86 |
| AT3G25820.1 | Thale cress | plastid | 54.36 | 48.83 |
| AT3G25830.1 | Thale cress | plastid | 54.36 | 48.83 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 38.22 | 48.24 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 35.06 | 47.85 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 30.43 | 47.26 |
| PGSC0003DMT400055897 | Potato | cytosol | 10.58 | 47.11 |
| AT3G25810.1 | Thale cress | plastid | 52.13 | 46.99 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 10.2 | 46.61 |
| PGSC0003DMT400089009 | Potato | cytosol | 13.91 | 46.58 |
| AT2G24210.1 | Thale cress | plastid | 50.28 | 45.85 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 34.32 | 43.84 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 43.78 | 42.83 |
| Solyc02g079840.1.1 | Tomato | cytosol | 42.67 | 42.75 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 43.23 | 41.17 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 38.96 | 40.31 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 43.97 | 40.17 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 12.24 | 38.6 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 41.19 | 37.44 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 40.63 | 36.87 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 29.68 | 36.36 |
| KRH22502 | Soybean | cytosol | 9.65 | 29.71 |
| AT5G48110.1 | Thale cress | plastid | 18.0 | 28.61 |
| AT1G61680.1 | Thale cress | plastid | 30.06 | 28.47 |
| AT3G14490.1 | Thale cress | plastid | 27.83 | 24.96 |
| AT4G13300.1 | Thale cress | cytosol | 25.42 | 24.73 |
| AT5G44630.1 | Thale cress | cytosol | 25.05 | 24.24 |
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 27.09 | 24.21 |
| AT4G15870.1 | Thale cress | plastid | 26.72 | 24.08 |
| AT3G29410.1 | Thale cress | plastid | 26.9 | 24.05 |
| AT4G13280.2 | Thale cress | cytosol | 24.68 | 24.01 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 26.53 | 23.52 |
| AT3G32030.1 | Thale cress | plastid | 26.35 | 23.51 |
| AT3G14520.1 | Thale cress | plastid | 26.16 | 23.31 |
| AT3G14540.1 | Thale cress | plastid | 25.97 | 23.26 |
| AT1G70080.1 | Thale cress | mitochondrion | 26.35 | 23.24 |
| AT3G29110.1 | Thale cress | plastid | 25.05 | 22.69 |
| AT4G20210.1 | Thale cress | plastid | 25.05 | 22.5 |
| AT3G29190.1 | Thale cress | plastid | 24.68 | 22.13 |
| AT4G20200.1 | Thale cress | plastid | 24.68 | 22.02 |
| AT2G23230.2 | Thale cress | plastid | 24.86 | 21.93 |
| AT1G66020.1 | Thale cress | plastid | 23.93 | 21.57 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 23.93 | 21.39 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 22.08 | 21.21 |
| AT4G20230.2 | Thale cress | plastid | 23.38 | 20.36 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:827376 | MapMan:9.1.4.2 | ProteinID:ANM66671.1 | ArrayExpress:AT4G16730 |
| EnsemblPlantsGene:AT4G16730 | RefSeq:AT4G16730 | TAIR:AT4G16730 | RefSeq:AT4G16730-TAIR-G | EnsemblPlants:AT4G16730.1 | TAIR:AT4G16730.1 |
| Unigene:At.54364 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009987 | GO:GO:0010333 |
| GO:GO:0016114 | GO:GO:0016829 | GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf |
| RefSeq:NP_001328553.1 | PFAM:PF01397 | PFAM:PF03936 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | SUPFAM:SSF48239 | SUPFAM:SSF48576 |
| Symbol:TPS02 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0001505813 | : | : | : | : | : |
Description
TPS02terpene synthase 02 [Source:TAIR;Acc:AT4G16730]
Coordinates
chr4:+:9402898..9406136
Molecular Weight (calculated)
63181.4 Da
IEP (calculated)
5.490
GRAVY (calculated)
-0.352
Length
539 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSISPLAR EYIYVKEVET AEKAILFKEE VRKTLNEIEG SIEQLEMIDS LQRLGISYHY KHEIHDILRK IHDQHGEIER ETQDLHATSL EFILLRQHGF
101: DVSQDAFDVF ISETGEFRKT LHSDIKGLLS LYEASYFSMD SEFKLKETRI YANKRLSEFV AESSKTICRE DETYILEMVK RALETPYHWS IRRLEARWYI
201: NVYEKKHEMN PLLLEFAAID FNMLQANHQE ELKLISSWWN STGLMKQLDF VRDRITESYF WTIGIFYEPE FKYCRKILTK IFMLIVIMDD IYDIYGTLEE
301: LELFTNVVEK WDVNHVERLP NYMRMCFLFL YNEINQIGYD VLRDKGLNVI PYLKQVWTDL FKTFLTESKW YKTGHKPSFE EYMQNGVISS SVPTILLHLF
401: SVLSDHISDQ TLTDDSKNHS VVRSCATILR LANDLATSTE EMARGDSPKS VQCYMYETRA SEEEARRHMQ SMISDSWDII NSDLKTAHTS SLPRGFLAAA
501: ANLNRVVQCI YRHGDGHGSP EKTKTVDYIQ SVLFNPVPL
101: DVSQDAFDVF ISETGEFRKT LHSDIKGLLS LYEASYFSMD SEFKLKETRI YANKRLSEFV AESSKTICRE DETYILEMVK RALETPYHWS IRRLEARWYI
201: NVYEKKHEMN PLLLEFAAID FNMLQANHQE ELKLISSWWN STGLMKQLDF VRDRITESYF WTIGIFYEPE FKYCRKILTK IFMLIVIMDD IYDIYGTLEE
301: LELFTNVVEK WDVNHVERLP NYMRMCFLFL YNEINQIGYD VLRDKGLNVI PYLKQVWTDL FKTFLTESKW YKTGHKPSFE EYMQNGVISS SVPTILLHLF
401: SVLSDHISDQ TLTDDSKNHS VVRSCATILR LANDLATSTE EMARGDSPKS VQCYMYETRA SEEEARRHMQ SMISDSWDII NSDLKTAHTS SLPRGFLAAA
501: ANLNRVVQCI YRHGDGHGSP EKTKTVDYIQ SVLFNPVPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.