Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 36.6 | 80.38 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 80.12 | 79.43 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 25.36 | 74.58 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 79.25 | 65.17 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 71.47 | 62.78 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 97.69 | 59.89 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 26.22 | 53.22 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 34.01 | 52.68 |
| CDY66920 | Canola | cytosol | 50.14 | 52.57 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 63.98 | 51.99 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 80.69 | 50.82 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 46.4 | 50.79 |
| CDY53129 | Canola | cytosol | 36.6 | 49.61 |
| CDY53648 | Canola | cytosol | 36.6 | 49.61 |
| PGSC0003DMT400089009 | Potato | cytosol | 22.48 | 48.45 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 77.52 | 45.59 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 77.23 | 45.12 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 76.37 | 44.69 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 36.02 | 42.81 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 22.77 | 42.25 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 35.45 | 41.84 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 62.25 | 41.46 |
| CDY62515 | Canola | cytosol | 47.84 | 41.4 |
| CDY54750 | Canola | cytosol | 47.55 | 41.15 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 61.67 | 35.61 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 59.37 | 35.58 |
| CDX83560 | Canola | plastid | 57.06 | 35.04 |
| CDX76827 | Canola | plastid | 56.2 | 34.88 |
| AT3G25830.1 | Thale cress | plastid | 58.79 | 34.0 |
| AT3G25820.1 | Thale cress | plastid | 58.79 | 34.0 |
| Bra025163.1-P | Field mustard | cytosol | 53.89 | 33.39 |
| AT3G25810.1 | Thale cress | plastid | 57.06 | 33.11 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 37.46 | 32.02 |
| KRH22502 | Soybean | cytosol | 16.14 | 32.0 |
| CDX90785 | Canola | plastid | 54.47 | 31.87 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 40.35 | 31.82 |
| CDY13587 | Canola | plastid | 53.89 | 31.75 |
| CDX83558 | Canola | plastid | 53.89 | 31.75 |
| Bra021082.1-P | Field mustard | cytosol | 49.28 | 31.32 |
| AT2G24210.1 | Thale cress | plastid | 53.31 | 31.3 |
| AT4G16740.1 | Thale cress | mitochondrion | 50.14 | 30.8 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 49.86 | 30.57 |
| AT4G16730.1 | Thale cress | cytosol | 47.26 | 30.43 |
| CDY13589 | Canola | plastid | 47.26 | 29.44 |
| Bra000727.1-P | Field mustard | plastid | 42.65 | 29.08 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 37.46 | 28.89 |
| Bra000568.1-P | Field mustard | plastid | 49.28 | 28.74 |
| CDX83208 | Canola | plastid | 49.28 | 28.74 |
| CDY21487 | Canola | plastid | 48.99 | 28.57 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 39.48 | 28.42 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 54.47 | 27.67 |
| CDY12909 | Canola | cytosol | 18.16 | 27.16 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 37.75 | 26.9 |
| Bra038504.1-P | Field mustard | plastid | 41.21 | 26.63 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 37.46 | 26.42 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 38.9 | 26.01 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 37.46 | 25.64 |
| PGSC0003DMT400055897 | Potato | cytosol | 8.93 | 25.62 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 37.18 | 25.44 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 37.18 | 25.44 |
| CDY68676 | Canola | cytosol | 26.22 | 24.2 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 36.02 | 24.18 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 39.48 | 23.74 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 27.95 | 23.6 |
| Solyc01g105960.2.1 | Tomato | cytosol | 23.34 | 22.88 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 27.09 | 22.43 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 31.41 | 21.46 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 29.11 | 20.61 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 36.89 | 19.84 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 20.17 | 18.04 |
| Bra025164.1-P | Field mustard | cytosol | 54.47 | 17.8 |
| Bra027079.1-P | Field mustard | plastid | 15.56 | 16.22 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 5.19 | 15.13 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 15.27 | 12.62 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 8.07 | 11.16 |
| CDY61957 | Canola | plastid | 11.24 | 10.32 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 7.78 | 9.41 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 11.24 | 8.09 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 7.2 | 8.06 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 6.92 | 7.84 |
| CDY12910 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | ProteinID:CBI40171 | ProteinID:CBI40171.3 | UniProt:D7UBQ6 |
| EMBL:FN596752 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf |
| PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N_sf |
| InterPro:Terpene_synthase_metal-bd | UniParc:UPI0001BE52D6 | ArrayExpress:VIT_13s0067g03770 | EnsemblPlantsGene:VIT_13s0067g03770 | EnsemblPlants:VIT_13s0067g03770.t01 | SEG:seg |
Description
No Description!
Coordinates
chr13_random:-:2109042..2110741
Molecular Weight (calculated)
40725.9 Da
IEP (calculated)
4.763
GRAVY (calculated)
-0.259
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRLEARWFI DAYERSQDMN PILLEFAKLD YNMVQAKHQE DLKYASRWWR STRLGEKLSF ARDRLMENFL WTVGEIFEPQ FGYCRRMLTK VNAMITTIDD
101: VYDVYGTLEE LELFTDAVDR WDINAMDQLP EYMKICFLAL YNSTNEMAYD LLKEQGSHII AYLRKAWADL CKSYLLEAKW YHARYTPTLK EYLSNAWISI
201: SAPVILVHAF FFVTNPITED ALECLEQYCN IIRWSSIILR LSDDLGTSSD ELKRGDVPKS IQCYMHETGA CEEDAREHIK CLIGETWKKM NEDRVMESPF
301: SQTFIGIAIN LARMSQCMYQ YGDGHGVQDR ETKDRVLSLL IEPIPLV
101: VYDVYGTLEE LELFTDAVDR WDINAMDQLP EYMKICFLAL YNSTNEMAYD LLKEQGSHII AYLRKAWADL CKSYLLEAKW YHARYTPTLK EYLSNAWISI
201: SAPVILVHAF FFVTNPITED ALECLEQYCN IIRWSSIILR LSDDLGTSSD ELKRGDVPKS IQCYMHETGA CEEDAREHIK CLIGETWKKM NEDRVMESPF
301: SQTFIGIAIN LARMSQCMYQ YGDGHGVQDR ETKDRVLSLL IEPIPLV
001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
Arabidopsis Description
TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.