Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 55.48 | 99.05 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 73.32 | 99.05 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 14.13 | 50.63 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 30.57 | 49.86 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 29.86 | 48.29 |
| KRH22759 | Soybean | cytosol | 48.23 | 48.06 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 46.11 | 47.37 |
| KRH26550 | Soybean | cytosol | 34.98 | 47.14 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 34.98 | 46.37 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 32.33 | 46.33 |
| KRH55947 | Soybean | cytosol | 26.33 | 46.13 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 46.11 | 46.11 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 34.28 | 45.97 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 43.82 | 45.34 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 45.58 | 43.73 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 39.75 | 43.19 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 44.52 | 42.5 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 44.52 | 42.42 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 8.83 | 42.37 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 16.61 | 41.96 |
| PGSC0003DMT400095524 | Potato | cytosol | 32.33 | 41.59 |
| Solyc03g007730.1.1 | Tomato | cytosol | 40.64 | 40.93 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 41.7 | 40.76 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 43.11 | 40.6 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 31.45 | 40.45 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.48 | 40.34 |
| TraesCS2B01G031300.1 | Wheat | cytosol | 18.37 | 38.66 |
| TraesCS2B01G031400.1 | Wheat | cytosol | 18.2 | 38.29 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 19.43 | 37.67 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 12.19 | 36.9 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 19.08 | 36.73 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 25.09 | 36.6 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 31.1 | 36.51 |
| HORVU2Hr1G003360.2 | Barley | plastid | 36.75 | 36.17 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 33.04 | 36.03 |
| TraesCS2A01G022400.1 | Wheat | plastid | 36.04 | 35.98 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 25.8 | 35.96 |
| TraesCS2D01G023100.1 | Wheat | plastid | 35.87 | 35.93 |
| Zm00001d004279_P001 | Maize | mitochondrion | 30.39 | 35.68 |
| HORVU2Hr1G003420.1 | Barley | plastid | 35.69 | 35.63 |
| TraesCSU01G238200.1 | Wheat | plastid | 24.73 | 35.62 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 32.69 | 35.58 |
| TraesCS2B01G032300.2 | Wheat | plastid | 35.51 | 35.45 |
| TraesCS2B01G031100.1 | Wheat | plastid | 35.51 | 35.45 |
| TraesCS2D01G023600.1 | Wheat | plastid | 35.69 | 35.38 |
| TraesCS2B01G031000.1 | Wheat | plastid | 35.51 | 35.33 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 17.84 | 35.19 |
| TraesCS2B01G030900.1 | Wheat | plastid | 29.33 | 35.17 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 30.57 | 35.16 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 30.04 | 34.91 |
| TraesCS7D01G487700.2 | Wheat | cytosol | 26.86 | 34.86 |
| OQU81208 | Sorghum | mitochondrion, plastid | 35.87 | 34.82 |
| TraesCS2B01G031500.1 | Wheat | plastid | 32.51 | 34.52 |
| TraesCS2A01G022300.1 | Wheat | plastid | 36.22 | 34.45 |
| EER92447 | Sorghum | plastid | 36.93 | 34.38 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 24.73 | 34.06 |
| HORVU2Hr1G003390.1 | Barley | plastid | 35.69 | 34.01 |
| TraesCS2A01G022600.1 | Wheat | plastid | 34.28 | 33.62 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 26.68 | 33.56 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 29.68 | 33.14 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 29.68 | 33.07 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 29.51 | 32.94 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 29.51 | 32.94 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 30.04 | 32.88 |
| TraesCS2D01G023800.1 | Wheat | plastid | 33.75 | 32.65 |
| TraesCS7B01G407200.1 | Wheat | cytosol | 33.57 | 32.53 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 28.09 | 32.45 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 32.69 | 32.06 |
| Zm00001d018611_P001 | Maize | cytosol, extracellular, mitochondrion, peroxisome | 24.03 | 32.0 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 17.14 | 31.29 |
| TraesCS7A01G500100.1 | Wheat | cytosol | 33.39 | 31.24 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 16.78 | 31.05 |
| HORVU7Hr1G111960.3 | Barley | cytosol, nucleus, peroxisome | 32.33 | 30.96 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 29.51 | 25.89 |
| KXG34246 | Sorghum | cytosol | 31.1 | 24.48 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 19.26 | 22.61 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:100240859 | wikigene:100240859 | EntrezGene:100246686 | wikigene:100246686 |
| MapMan:9.1.4.2 | ProteinID:ADR74207 | ProteinID:ADR74207.1 | ProteinID:ADR74208 | ProteinID:ADR74208.1 | EMBL:AM449733 |
| EMBL:AM462718 | ProteinID:CAN74710 | ProteinID:CAN74710.1 | ProteinID:CAN76554 | ProteinID:CAN76554.1 | ProteinID:CBI38337 |
| ProteinID:CBI38337.3 | UniProt:D7U6G8 | EMBL:FN596525 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | GO:GO:0046872 |
| EMBL:HM807388 | EMBL:HM807389 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | EntrezGene:LOC100240859 |
| wikigene:LOC100240859 | EntrezGene:LOC100246686 | wikigene:LOC100246686 | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 |
| PANTHER:PTHR31225:SF9 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf |
| InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00015CD7B7 | ArrayExpress:VIT_00s0361g00060 | EnsemblPlantsGene:VIT_00s0361g00060 | EnsemblPlants:VIT_00s0361g00060.t01 |
| RefSeq:XP_002264134 | RefSeq:XP_002264134.2 | SEG:seg | : | : | : |
Description
(E)-beta-ocimene/(E,E)-alpha-farnesene synthase [Source:UniProtKB/TrEMBL;Acc:D7U6G8]
Coordinates
chrUn:+:25621460..25624034
Molecular Weight (calculated)
64827.6 Da
IEP (calculated)
4.997
GRAVY (calculated)
-0.196
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSANHIQNS QEFLQCQAKS EGVGTISQRR SANYKPNIWK YDCVQSLTSE YMGEPYTRQV QQLKGEVRRV FVEVVEPLAK LEFIDSIKKL GLGNFFEEEI
101: REALDTIMSD KNNSPGIKAN LYAAALCFRL LRQHGYGVSQ DMFSGFMEEV GMFSKSTCTN VKGMIELFEA SHLALEGENI LDEAKAFSSG YLKEIISNLD
201: NNLAKQVVHS LERPLHWRVQ WFDIRWYIDF YEEEGVNLDL LKLAKLNFNM VQAVHQKDLK HISRWWRNLG LIENLSFTRD RLVESFLCGV GFSSEPQHGS
301: FRLCITKVII FIQVLDDVYD IYGSLDELEQ FTNAVDRWDS KEIQQLPESM KLCFQVLQDT TNAVANEIQK EKGWDNVLPM LQQAWANFCK SLFVEAKWYN
401: KGYTPTLQEY LSNAWISSSV SLLSVHAIFF CVPHEAKEEM VDFLEKNQEL VYSSSLILRL CNDLGTLEAE LERGDAASSV LCYMKEVNVS EEISRTHIRG
501: MLVKTWKNMN GHCIASSPLL QPIVNIITNI ARVAQWIYQY GDGLGIPDRE TKAQILSLLI EPLGIN
101: REALDTIMSD KNNSPGIKAN LYAAALCFRL LRQHGYGVSQ DMFSGFMEEV GMFSKSTCTN VKGMIELFEA SHLALEGENI LDEAKAFSSG YLKEIISNLD
201: NNLAKQVVHS LERPLHWRVQ WFDIRWYIDF YEEEGVNLDL LKLAKLNFNM VQAVHQKDLK HISRWWRNLG LIENLSFTRD RLVESFLCGV GFSSEPQHGS
301: FRLCITKVII FIQVLDDVYD IYGSLDELEQ FTNAVDRWDS KEIQQLPESM KLCFQVLQDT TNAVANEIQK EKGWDNVLPM LQQAWANFCK SLFVEAKWYN
401: KGYTPTLQEY LSNAWISSSV SLLSVHAIFF CVPHEAKEEM VDFLEKNQEL VYSSSLILRL CNDLGTLEAE LERGDAASSV LCYMKEVNVS EEISRTHIRG
501: MLVKTWKNMN GHCIASSPLL QPIVNIITNI ARVAQWIYQY GDGLGIPDRE TKAQILSLLI EPLGIN
001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
Arabidopsis Description
TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.