CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26550	Soybean	cytosol	62.68	84.76
KRH55947	Soybean	cytosol	40.67	71.52
VIT_00s0392g00030.t01	Wine grape	cytosol	28.87	51.73
VIT_00s0361g00060.t01	Wine grape	cytosol	48.06	48.23
VIT_00s0392g00060.t01	Wine grape	cytosol	33.63	45.58
Solyc02g079890.1.1	Tomato	cytosol, plastid	40.67	42.23
PGSC0003DMT400095524	Potato	cytosol	31.16	40.23
Solyc03g007730.1.1	Tomato	cytosol	39.61	40.04
KRH56086	Soybean	plastid	39.79	37.86
KRH25428	Soybean	plastid	39.26	37.04
KRG90197	Soybean	plastid	38.56	36.14
KRH38260	Soybean	plastid	36.97	34.88
KRH36347	Soybean	cytosol	13.2	33.48
KRH25425	Soybean	cytosol	22.01	33.24
TraesCS2B01G031300.1	Wheat	cytosol	15.67	33.09
TraesCS2B01G031400.1	Wheat	cytosol	15.67	33.09
TraesCS7D01G487700.2	Wheat	cytosol	25.18	32.8
Zm00001d004279_P001	Maize	mitochondrion	27.46	32.37
KRH41974	Soybean	cytosol	16.55	32.3
OQU81208	Sorghum	mitochondrion, plastid	32.75	31.9
TraesCS2D01G023100.1	Wheat	plastid	31.51	31.68
HORVU2Hr1G003420.1	Barley	plastid	31.51	31.57
HORVU2Hr1G003360.2	Barley	plastid	31.87	31.48
KRH22502	Soybean	cytosol	9.68	31.43
TraesCS2B01G032300.2	Wheat	plastid	31.34	31.39
TraesCS2B01G031100.1	Wheat	plastid	31.34	31.39
KRH26850	Soybean	nucleus, plastid	31.34	31.34
TraesCS2A01G022400.1	Wheat	plastid	31.16	31.22
TraesCS2B01G031600.1	Wheat	mitochondrion	28.52	31.15
EER92447	Sorghum	plastid	33.27	31.09
TraesCS2D01G023600.1	Wheat	plastid	31.16	31.0
HORVU2Hr1G003390.1	Barley	plastid	32.39	30.98
TraesCS2B01G031000.1	Wheat	plastid	30.99	30.93
TraesCS2B01G031500.1	Wheat	plastid	28.87	30.77
TraesCS2A01G022600.1	Wheat	plastid	30.99	30.5
KRG93110	Soybean	mitochondrion	15.85	30.41
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	31.51	30.29
KRH22499	Soybean	cytosol	12.15	30.26
TraesCS7B01G407200.1	Wheat	cytosol	30.99	30.14
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	22.54	30.12
TraesCS2D01G023800.1	Wheat	plastid	30.81	29.91
TraesCS2A01G022300.1	Wheat	plastid	31.16	29.75
TraesCS2B01G030900.1	Wheat	plastid	24.65	29.66
KRH26852	Soybean	plastid	30.28	29.45
TraesCSU01G238200.1	Wheat	plastid	20.25	29.26
KRH22498	Soybean	plastid	29.58	29.02
TraesCS7A01G500100.1	Wheat	cytosol	30.81	28.93
KRH49914	Soybean	plastid	27.82	27.57
KRH21637	Soybean	cytosol	25.7	27.34
KRH25917	Soybean	plastid	12.85	25.89
KRH49915	Soybean	plastid	26.41	25.51
KXG34246	Sorghum	cytosol	30.46	24.06

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100812119	MapMan:9.1.4.2	EMBL:ACUP02008434	EnsemblPlantsGene:GLYMA_13G321100
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	UniProt:I1MS82	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH22759	ProteinID:KRH22759	ProteinID:KRH22759.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000233E539	:	:

Description

hypothetical protein

Coordinates

chr13:-:41540417..41543961

Molecular Weight (calculated)

65848.0 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.263

Length

568 amino acids

Sequence
(BLAST)

001: MNHSYANQSA QEVNIVTEDT RRSANYKPNI WKYDFLQSLD SKYDEEEFVM QLNKRVTEVK GLFVQEASVL QKLELADWIQ KLGLANYFQK DINEFLESIL
101: VYVKNSNINP SIEHSLHVSA LCFRLLRQHG YPVLPDTLSN FLDEKGKVIR KSSYVCYGKD VVELLEASHL SLEGEKILDE AKNCAINSLK FGFSPSSINI
201: NRHSNLVVEK MVHALELPSH WRVQWFEVKW HVEQYKQQKN VDPILLELTK LNFNMIQAKL QIEVKDLSRW WENLGIKKEL SFARNRLVES FMCAAGVAFE
301: PKYKAVRKWL TKVIIFVLII DDVYDIHASF EELKPFTLAF ERWDDKELEE LPQYMKICVH ALKDVTNEIA YEIGGENNFH SVLPYLKKAW IDFCKALYVE
401: AKWYNKGYIP SLEEYLSNAW ISSSGPVILL LSYFATMNQA MDIDDFLHTY EDLVYNVSLI IRLCNDLGTT AAEREKGDVA SSILCYMNQK DASEEKARKH
501: IQDMIHKAWK KINGHYCSNR VASVEPFLTQ AINAARVAHT LYQNGDGFGI QDRDIKKHIL SLVVEPLR

Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.