CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105850.2.1	Tomato	cytosol	26.95	27.34
KRH41974	Soybean	cytosol	20.21	19.59
KRH22499	Soybean	cytosol	15.6	19.3
KRG93110	Soybean	mitochondrion	19.5	18.58
KRH36347	Soybean	cytosol	14.54	18.3
KRG90197	Soybean	plastid	34.04	15.84
KRH38260	Soybean	plastid	32.27	15.12
PGSC0003DMT400015998	Potato	plastid	30.85	14.97
KRH56086	Soybean	plastid	31.56	14.91
KRH25425	Soybean	cytosol	19.86	14.89
KRH25428	Soybean	plastid	31.21	14.62
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	29.43	14.07
Solyc01g105920.2.1	Tomato	plastid	29.08	13.85
Solyc01g105870.2.1	Tomato	plastid	29.79	13.84
KRH26850	Soybean	nucleus, plastid	27.66	13.73
KRH26852	Soybean	plastid	28.37	13.7
Solyc01g105890.2.1	Tomato	plastid	29.43	13.63
KRH22498	Soybean	plastid	26.6	12.95
KRH22759	Soybean	cytosol	25.89	12.85
Solyc01g105900.2.1	Tomato	plastid	23.76	12.52
Solyc01g105940.2.1	Tomato	cytosol	4.61	12.38
KRH49915	Soybean	plastid	25.53	12.24
KRH49914	Soybean	plastid	24.47	12.04
KRH21637	Soybean	cytosol	22.34	11.8
KRH26550	Soybean	cytosol	14.54	9.76
KRH55947	Soybean	cytosol	9.22	8.05
KRH22502	Soybean	cytosol	2.13	3.43
Solyc01g105860.2.1	Tomato	cytosol	0.0	0.0
GSMUA_Achr4P07690_001	Banana	cytosol	0.0	0.0
PGSC0003DMT400067594	Potato	cytosol	0.0	0.0
Solyc01g105950.2.1	Tomato	extracellular	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	UniProt:A0A0R0H526	EMBL:ACUP02007383	EnsemblPlantsGene:GLYMA_12G1388002
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH25917
ProteinID:KRH25917	ProteinID:KRH25917.1	PFAM:PF01397	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0006ED61BF	:

Description

hypothetical protein

Coordinates

chr12:+:16733573..16737325

Molecular Weight (calculated)

32738.8 Da

IEP (calculated)

6.392

GRAVY (calculated)

-0.429

Length

282 amino acids

Sequence
(BLAST)

001: MTNVSSSLPI FAQDAKPPSH FTRNTANFSP SVWGDYFLYY VPSSVDLLMY TPGRNHMEDD SHIKQAQLTK EEVRKMLIAP IDNNFYFKLE FIDSVQRLGV
101: SYHFEHEIDG ALHQIYNIST KDNNIITHDD DLCHVALLFR LLRQQGYHIS SNVFYKFKDQ TRNFSEKAAN DIQGMLSLYE AAELRMHGED ILEEAHNFAL
201: VQLTKSLTTQ LSPSMIAQVK HSLRRSLRKG LPRLEATYYM SFYEEDSSHD EKLLTFAKLD FNMLQELHQK EVNNVTRVNI GF

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.