CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36347	Soybean	cytosol	29.82	30.36
KRG93110	Soybean	mitochondrion	28.95	22.3
KRH25425	Soybean	cytosol	34.21	20.74
VIT_12s0134g00040.t01	Wine grape	mitochondrion	16.67	16.96
KRH56086	Soybean	plastid	44.3	16.92
KRG90197	Soybean	plastid	44.74	16.83
KRH38260	Soybean	plastid	43.42	16.45
KRH25428	Soybean	plastid	42.54	16.11
KRH25917	Soybean	plastid	19.3	15.6
KRH26550	Soybean	cytosol	25.0	13.57
KRH41974	Soybean	cytosol	17.11	13.4
KRH26850	Soybean	nucleus, plastid	32.89	13.2
KRH55947	Soybean	cytosol	17.98	12.69
KRH22498	Soybean	plastid	31.58	12.44
KRH26852	Soybean	plastid	31.58	12.33
KRH49914	Soybean	plastid	30.7	12.22
KRH22759	Soybean	cytosol	30.26	12.15
KRH49915	Soybean	plastid	28.07	10.88
KRH21637	Soybean	cytosol	25.44	10.86
KRH22502	Soybean	cytosol	5.26	6.86

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:50.4.2	UniProt:A0A0R0H4G6	EMBL:ACUP02008415	EnsemblPlantsGene:GLYMA_13G3046002
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH22499
ProteinID:KRH22499	ProteinID:KRH22499.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF5
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0006ED86A6	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:40155003..40156549

Molecular Weight (calculated)

26506.5 Da

IEP (calculated)

7.966

GRAVY (calculated)

-0.558

Length

228 amino acids

Sequence
(BLAST)

001: MPNFSMDHQE NSCATRKQDT QFTKIENRCS AYYRPNRWTH EFVQSLGNHL VERAKKTTIA INIWNVPESF RDEEGNFKVK ISNSNDVQGM LSLYEASHLT
101: FEGESLWEAK PFSRTYLMNL LKQGIETEVA KEVRACKARF QHGSVTRKKE LQEVSRWWKD IGLASKLNFA SDRLVESVLW MLGMFPEPQF ANCRKELTNV
201: GKLITIINDV YDVYGTLDDY SSSQMLLR

Best Arabidopsis Sequence Match ( AT4G16730.2 )
(BLAST)

001: MIDSLQRLGI SYHYKHEIHD ILRKIHDQHG EIERETQDLH ATSLEFILLR QHGFDVSQDA FDVFISETGE FRKTLHSDIK GLLSLYEASY FSMDSEFKLK
101: ETRIYANKRL SEFVAESSKT ICREDETYIL EMVKRALETP YHWSIRRLEA RWYINVYEKK HEMNPLLLEF AAIDFNMLQA NHQEELKLIS SWWNSTGLMK
201: QLDFVRDRIT ESYFWTIGIF YEPEFKYCRK ILTKIFMLIV IMDDIYDIYG TLEELELFTN VVEKWDVNHV ERLPNYMRMC FLFLYNEINQ IGYDVLRDKG
301: LNVIPYLKQV WTDLFKTFLT ESKWYKTGHK PSFEEYMQNG VISSSVPTIL LHLFSVLSDH ISDQTLTDDS KNHSVVRSCA TILRLANDLA TSTEEMARGD
401: SPKSVQCYMY ETRASEEEAR RHMQSMISDS WDIINSDLKT AHTSSLPRGF LAAAANLNRV VQCIYRHGDG HGSPEKTKTV DYIQSVLFNP VPL

Arabidopsis Description

TPS02terpene synthase 02 [Source:TAIR;Acc:AT4G16730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.