CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25428	Soybean	plastid	76.55	75.91
KRH36347	Soybean	cytosol	19.26	51.34
KRG90197	Soybean	plastid	50.75	50.0
KRH38260	Soybean	plastid	48.91	48.51
KRH25425	Soybean	cytosol	28.31	44.95
KRH22499	Soybean	cytosol	16.92	44.3
KRG93110	Soybean	mitochondrion	20.94	42.23
KRH22759	Soybean	cytosol	37.86	39.79
KRH26550	Soybean	cytosol	27.3	38.81
KRH55947	Soybean	cytosol	20.27	37.46
KRH26850	Soybean	nucleus, plastid	34.0	35.74
KRH41974	Soybean	cytosol	17.09	35.05
KRH22502	Soybean	cytosol	10.22	34.86
KRH26852	Soybean	plastid	33.67	34.42
KRH22498	Soybean	plastid	33.33	34.37
KRH25917	Soybean	plastid	14.91	31.56
KRH49914	Soybean	plastid	29.82	31.06
KRH49915	Soybean	plastid	29.65	30.1
KRH21637	Soybean	cytosol	26.8	29.96

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EMBL:ACUP02004093	EnsemblPlantsGene:GLYMA_06G302200	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K7KY89
EnsemblPlants:KRH56086	ProteinID:KRH56086	ProteinID:KRH56086.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF5	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002949A04	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr6:-:49126984..49131961

Molecular Weight (calculated)

68746.2 Da

IEP (calculated)

6.678

GRAVY (calculated)

-0.315

Length

597 amino acids

Sequence
(BLAST)

001: MTLVNSTLLN SSFISNFSFG KPQKPEGTNN LLLRRIICPI RCNATTTTTN VNASERKSAN YQPNLWNYDF LQSLKCDHAD IRYEDKAKKL LEEVRRMIKD
101: ENTDIWIKLE LIDDVKRLGI GYSFDMEIGE ALHRCLSSET FIDTITHNHR SLHETALSFR VLREYGYDVT TDIFERFKDY NGNFKAILSR DVKGMLSLYE
201: ASFLSYEGEQ ILDEAKAFTS FHLKGALKEG RSNTMILEQV NHAMELPLHH RIQRLEARWY IESYAKRKDA NMVLLEAAKL DFNIVQSTLQ TDLQEMSRWW
301: KGMGLASKLS FSRDRLMECF FWTVGMVFEP QLSDLRKGLT KVASLITTID DVYDVYGTLD ELELFTAAVE SWDVKAVQVL PDYMKICFLA LYNTVNEFAY
401: DALKEQGQNI LPYLTKAWSN MLKAFLEEAK WSRDKHVPKF DDYLNNAWVS VSGVVILTHA YFLLNHSITK EALQSLENYH ALLRRSSTIF RLCNDLGTSK
501: AELERGEAAS SIVCYMRESG ASEEGAYKHI RRLLNETWKK MNKDKVSQSP FPKPFIEIAI NLGRISQCTY QYGDGHGAPD STVENRIRSL IIEPIAI

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.