CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH56086	Soybean	plastid	75.91	76.55
KRH36347	Soybean	cytosol	18.94	50.89
KRG90197	Soybean	plastid	48.34	48.02
KRH38260	Soybean	plastid	47.67	47.67
KRH25425	Soybean	cytosol	27.74	44.41
KRH22499	Soybean	cytosol	16.11	42.54
KRG93110	Soybean	mitochondrion	20.27	41.22
KRH22759	Soybean	cytosol	37.04	39.26
KRH26550	Soybean	cytosol	26.74	38.33
KRH55947	Soybean	cytosol	20.1	37.46
KRH26850	Soybean	nucleus, plastid	33.22	35.21
KRH22498	Soybean	plastid	33.39	34.72
KRH26852	Soybean	plastid	33.39	34.42
KRH41974	Soybean	cytosol	16.45	34.02
KRH22502	Soybean	cytosol	9.47	32.57
KRH49914	Soybean	plastid	29.73	31.24
KRH25917	Soybean	plastid	14.62	31.21
KRH49915	Soybean	plastid	28.57	29.25
KRH21637	Soybean	cytosol	25.42	28.65

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	EMBL:ACUP02007254	ncoils:Coil	EnsemblPlantsGene:GLYMA_12G102000
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	UniProt:I1LRT2	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH25428	ProteinID:KRH25428	ProteinID:KRH25428.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF5	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002956A95	:	:

Description

hypothetical protein

Coordinates

chr12:+:9043335..9048807

Molecular Weight (calculated)

69770.7 Da

IEP (calculated)

7.082

GRAVY (calculated)

-0.323

Length

602 amino acids

Sequence
(BLAST)

001: MALDSSSMLL NFSFTPPLVS FSKHQKQRGI NLLVRRIGST SQYYCLATST NVRERKSANY QPNLWNYDFL QSLKNDYADV KYEIMARKLE EVRRMIKDEN
101: SEIWVTLDLI DNVKRLGLSY HFDKEIREAL HRFLSLERCN ATNIHTGLHE TALSFRLLRE YGDDVSADVF ERFEDNNGNF KASLSRDMKG MLSLYEASFL
201: SYEEELILDK TKAFSSFHLR GALKEGRSNS MLLEQVNHAL ELPLHHRIQR LEARWYIESY AKRKDANWVL LEAAKLDFNI VQSTLQKDLQ EMSRWWKRMG
301: LAPKLSFSRD RLMECFFWSM GMAFEPQFSD LRKGLTKVTS LITTIDDVYD VYGSLDELEL FTKAVESWDI KAVQVMPEYM KICFLALYNT VNEFAYDALK
401: IKGQNILPHL TKAWSVMLKA FLQEAKWCRD KYLPPFEDYL NNAWVSVSGV VILTHAYFLL NDNITKDALD SLDNYHDLLR RPSIIFRLCN DLGTSRAELQ
501: RGEAASSIVC NMRESCVTEE GAYKNIHSLL DETWKKMNKD RAMHSPFSKP FVEAAINLAR ISHCTYLNGD GHGAPDIAAK NRIRSLIIEP IPLREINADI
601: VQ

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.