CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26852	Soybean	plastid	88.6	87.84
KRH26850	Soybean	nucleus, plastid	76.34	77.82
VIT_12s0134g00140.t01	Wine grape	cytosol	29.02	57.53
VIT_12s0134g00090.t01	Wine grape	cytosol	28.84	56.8
GSMUA_Achr11P...	Banana	cytosol	41.97	48.6
KRH36347	Soybean	cytosol	14.51	37.5
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	11.23	35.33
KRH41974	Soybean	cytosol	17.27	34.36
KRG90197	Soybean	plastid	35.41	33.83
KRH38260	Soybean	plastid	35.06	33.72
KRH49914	Soybean	plastid	33.33	33.68
KRH25428	Soybean	plastid	34.72	33.39
KRH56086	Soybean	plastid	34.37	33.33
KRH22502	Soybean	cytosol	10.02	33.14
KRH21637	Soybean	cytosol	30.4	32.96
KRH49915	Soybean	plastid	32.47	31.97
KRH22499	Soybean	cytosol	12.44	31.58
KRH25425	Soybean	cytosol	20.21	31.12
KRH55947	Soybean	cytosol	17.27	30.96
KRH22759	Soybean	cytosol	29.02	29.58
KRG93110	Soybean	mitochondrion	15.03	29.39
KRH26550	Soybean	cytosol	20.73	28.57
KRH25917	Soybean	plastid	12.95	26.6

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100820029	MapMan:9.1.4.2	EMBL:ACUP02008415	EnsemblPlantsGene:GLYMA_13G304500
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:K7M2U1	EnsemblPlants:KRH22498	ProteinID:KRH22498	ProteinID:KRH22498.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF11	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001BA8935	SEG:seg	:

Description

hypothetical protein

Coordinates

chr13:-:40139731..40145370

Molecular Weight (calculated)

66254.7 Da

IEP (calculated)

6.459

GRAVY (calculated)

-0.258

Length

579 amino acids

Sequence
(BLAST)

001: MSLNAMAFTK LRVSSFTSSL ASNNSRPSIY QPWNLSLQSS KIGMVPNKLS IKSVAFSDKV PSQTYLGTKD LDQVIRKGQE ALLNSSDPLR TLKIIDTIQK
101: LGIEHHFEKE INLQLGRVGD WDTAEDLFAT ALQFRLLRHN GWPTCSDVFN KFLDKSGNFK ESVTRDIWGM LSLYEASYLG AKGEEVLQQA MDYSRAHLCQ
201: SLPHLSPKVR SIVAEALKLP RHQRMVGLEA KNYMVEYSQA SNQIPALLEL ARLDYDMIQS MHQKELAEIS RWWKDLGLIE RLGFGRDGPR ECFLWALGIF
301: PEPRHSSCRI ELAKAICVLQ VIDDVFDTYG TLDELVLFTK AIKRWDLDAM EQLPEYMKIC YMALYNTTHE IAYKIQKDHS LTVVACLKIT WIDLIEAYLK
401: EANWFNNKHV PTFQQYLDNG VISSGSYLAL VHATFLIGDD LSKETIFMMN PYPRLFSCSG KILRLWDDLG TSRDEQERGD NACSIQCLMK QNNISDENVA
501: RKLIRQLIDN LWPELNGLTM TTNLPLSVMR ASLNMARTSQ VIYRHGDDQN MPTVDEHVQT LLFTPSINYR DENDINHVI

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.