CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH26550	Soybean	cytosol	63.47	48.81
KRH22759	Soybean	cytosol	71.52	40.67
VIT_00s0392g00030.t01	Wine grape	cytosol	36.53	37.22
VIT_00s0361g00060.t01	Wine grape	cytosol	46.13	26.33
KRH22502	Soybean	cytosol	12.38	22.86
Solyc02g079890.1.1	Tomato	cytosol, plastid	38.7	22.85
Solyc03g007730.1.1	Tomato	cytosol	39.32	22.6
TraesCS2B01G031400.1	Wheat	cytosol	18.58	22.3
TraesCS2B01G031300.1	Wheat	cytosol	18.58	22.3
VIT_00s0392g00060.t01	Wine grape	cytosol	28.79	22.2
KRH36347	Soybean	cytosol	15.17	21.88
PGSC0003DMT400095524	Potato	cytosol	29.1	21.36
KRH56086	Soybean	plastid	37.46	20.27
KRH25428	Soybean	plastid	37.46	20.1
TraesCS2B01G031600.1	Wheat	mitochondrion	32.2	20.0
Zm00001d004279_P001	Maize	mitochondrion	28.79	19.29
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	24.77	18.82
KRH26850	Soybean	nucleus, plastid	32.82	18.66
TraesCS2D01G023100.1	Wheat	plastid	32.2	18.41
KRG90197	Soybean	plastid	34.37	18.32
TraesCS2A01G022600.1	Wheat	plastid	32.51	18.2
HORVU2Hr1G003420.1	Barley	plastid	31.89	18.17
TraesCS2B01G032300.2	Wheat	plastid	31.89	18.17
TraesCS2A01G022400.1	Wheat	plastid	31.58	17.99
KRH22499	Soybean	cytosol	12.69	17.98
TraesCS2B01G031000.1	Wheat	plastid	31.58	17.93
TraesCS2D01G023600.1	Wheat	plastid	31.58	17.86
TraesCS2B01G031100.1	Wheat	plastid	31.27	17.81
HORVU2Hr1G003360.2	Barley	plastid	31.58	17.74
OQU81208	Sorghum	mitochondrion, plastid	31.89	17.67
KRH38260	Soybean	plastid	32.82	17.61
TraesCS2D01G023800.1	Wheat	plastid	31.89	17.61
TraesCS2B01G030900.1	Wheat	plastid	25.7	17.58
TraesCS2A01G022300.1	Wheat	plastid	32.2	17.48
TraesCS7D01G487700.2	Wheat	cytosol	23.53	17.43
HORVU2Hr1G003390.1	Barley	plastid	31.89	17.34
KRH22498	Soybean	plastid	30.96	17.27
TraesCS2B01G031500.1	Wheat	plastid	28.48	17.26
EER92447	Sorghum	plastid	31.89	16.94
KRH26852	Soybean	plastid	30.34	16.78
TraesCS7B01G407200.1	Wheat	cytosol	30.03	16.61
TraesCS7A01G500100.1	Wheat	cytosol	30.03	16.03
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	28.79	15.74
TraesCSU01G238200.1	Wheat	plastid	18.89	15.52
KRG93110	Soybean	mitochondrion	13.93	15.2
KRH25425	Soybean	cytosol	17.65	15.16
KRH21637	Soybean	cytosol	24.77	14.98
KRH49914	Soybean	plastid	25.7	14.49
KRH49915	Soybean	plastid	25.7	14.12
KRH41974	Soybean	cytosol	12.07	13.4
KXG34246	Sorghum	cytosol	27.55	12.38
KRH25917	Soybean	plastid	8.05	9.22

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A0R0JUM5	EMBL:ACUP02004070	EnsemblPlantsGene:GLYMA_06G291800
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH55947
ProteinID:KRH55947	ProteinID:KRH55947.1	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0006EDF71F	:

Description

hypothetical protein

Coordinates

chr6:-:48043871..48046874

Molecular Weight (calculated)

37698.5 Da

IEP (calculated)

4.809

GRAVY (calculated)

-0.245

Length

323 amino acids

Sequence
(BLAST)

001: MRKDSYAGKA KDVMELLEAS HLVLEGENIL NEAKTWNGPC LGASFPWEST IWFEVKWHIK QYKIEKYMDP ILLELDTLNF NMIQAKLQME NLGIKEDLSL
101: ARNRLVESFL CAAGVAFEPN YTSGRKWLTK VIIFVLVIDD VYDIYASFEE LKPFTMTFER WDEKDLEELP EYIRICVHAL KDVRNEIAYE ILFLRMLSEM
201: KLPYLKKVNQ VTDMEDFLPT YEDLVYNVSL LIQLCNDLGT TVAERERGDT ASSILCYMNE MNVSEEKARK KIQDMINKAW KKINGHCSTQ VASMKPFLNQ
301: AINAARMAHT LYQNEDAWFW YPG

Best Arabidopsis Sequence Match ( AT4G16730.1 )
(BLAST)

001: MGSSISPLAR EYIYVKEVET AEKAILFKEE VRKTLNEIEG SIEQLEMIDS LQRLGISYHY KHEIHDILRK IHDQHGEIER ETQDLHATSL EFILLRQHGF
101: DVSQDAFDVF ISETGEFRKT LHSDIKGLLS LYEASYFSMD SEFKLKETRI YANKRLSEFV AESSKTICRE DETYILEMVK RALETPYHWS IRRLEARWYI
201: NVYEKKHEMN PLLLEFAAID FNMLQANHQE ELKLISSWWN STGLMKQLDF VRDRITESYF WTIGIFYEPE FKYCRKILTK IFMLIVIMDD IYDIYGTLEE
301: LELFTNVVEK WDVNHVERLP NYMRMCFLFL YNEINQIGYD VLRDKGLNVI PYLKQVWTDL FKTFLTESKW YKTGHKPSFE EYMQNGVISS SVPTILLHLF
401: SVLSDHISDQ TLTDDSKNHS VVRSCATILR LANDLATSTE EMARGDSPKS VQCYMYETRA SEEEARRHMQ SMISDSWDII NSDLKTAHTS SLPRGFLAAA
501: ANLNRVVQCI YRHGDGHGSP EKTKTVDYIQ SVLFNPVPL

Arabidopsis Description

TPS02terpene synthase 02 [Source:TAIR;Acc:AT4G16730]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.