CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	41.86	70.82
TraesCS7D01G487700.2	Wheat	cytosol	35.47	58.49
TraesCS7B01G407200.1	Wheat	cytosol	42.84	52.74
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	42.28	51.44
TraesCS7A01G500100.1	Wheat	cytosol	42.56	50.58
OQU81208	Sorghum	mitochondrion, plastid	29.9	36.88
EER92447	Sorghum	plastid	31.02	36.68
VIT_00s0392g00030.t01	Wine grape	cytosol	15.44	35.02
VIT_00s0361g00060.t01	Wine grape	cytosol	24.48	31.1
KRH26550	Soybean	cytosol	18.08	30.95
KRH22759	Soybean	cytosol	24.06	30.46
VIT_00s0392g00060.t01	Wine grape	cytosol	16.83	28.88
KRH55947	Soybean	cytosol	12.38	27.55
Solyc02g079890.1.1	Tomato	cytosol, plastid	20.86	27.42
Solyc03g007730.1.1	Tomato	cytosol	20.45	26.16
EES04391	Sorghum	cytosol	14.88	25.66
PGSC0003DMT400095524	Potato	cytosol	14.88	24.32
KXG29327	Sorghum	plastid	18.5	24.18
EES04390	Sorghum	plastid	18.92	24.11
EES04392	Sorghum	plastid	18.5	24.05
OQU92401	Sorghum	cytosol	17.94	22.83
EES04394	Sorghum	endoplasmic reticulum	18.64	22.52
EES09506	Sorghum	cytosol	15.86	20.77
OQU83527	Sorghum	cytosol	7.09	20.08

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A1B6Q8K9	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KXG34246	ProteinID:KXG34246
ProteinID:KXG34246.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF18	EnsemblPlantsGene:SORBI_3002G002300
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI00081AC8AF	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:317994..320994

Molecular Weight (calculated)

79317.6 Da

IEP (calculated)

4.786

GRAVY (calculated)

-0.238

Length

719 amino acids

Sequence
(BLAST)

001: MDCAYHTIMS SVVGVPPVVV CSDSEHRQQV QVAAAVDVES PPPVLQLRRR SANYQPTTWD YDSIISSLSR RPLPLGASEE TEEEEAADDD DDANLLQVVV
101: ANGNTDSMYN ISSETELVQV QASLKDSVRR LLLVLQEEDD DDRSRLMLIR TIHQLQSLGI AYHFHQEIRG ILLSLHQQQQ QHHLDLHSAA LLFRMLRGLG
201: IPASTDMLMS ALREEDDKVI TDSDGVLALY QASYLAFPGP GETVLDQARA LAIGKRAAGR RDDDDDSDCT RLPLPLPLHW TAPRLQAMWS LKGKGDDHNH
301: NKKVAVVDPA ILQLAQVDFN LVQALHRREL AEVTRWWKES GLGVGDYSFA RDRVVECFFC AACIAPEPRL AECREVLAKI GALLVHLDDI YDVYGTLDEL
401: QAFTDAIAAA SWENCRCNHL PEYMKAMYSA IWTTSVAAAD RVLEKHGYDM LPLYKKAWHE LCKAFLVEAQ WQQQGHMPSF AEYVSNGWVT STGPLLLLHA
501: LPAAGIIPIT QTQTQTQTQA NNGAGAGGIV DYPRLVELSS TIFRLCNDCA SHEAESERGD APSSIACCMA EPWCAGEEQA RDAVQGVIAE TWKALNWEVV
601: VVAASSSSGS VGNDNDPCCS SSETAESMDD HGQPVPQPRP DHPLHLPGRG RHQFADSSHE ANGQGPALQP YRPSCPLATA SKLLACMQHA FEWPVLLCSA
701: HQVLVLYSDK TYIKSYINM

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.