CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029523_P001	Maize	cytosol	82.48	92.09
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	73.63	75.5
HORVU7Hr1G122730.1	Barley	cytosol	67.43	75.45
HORVU5Hr1G005860.1	Barley	cytosol	72.57	72.95
TraesCS7A01G499300.2	Wheat	cytosol	63.19	64.79
EES09506	Sorghum	cytosol	35.04	36.07
OQU83527	Sorghum	cytosol	13.27	29.53
EER92447	Sorghum	plastid	27.08	25.16
OQU81208	Sorghum	mitochondrion, plastid	23.01	22.3
EES04391	Sorghum	cytosol	16.11	21.82
EES04390	Sorghum	plastid	21.06	21.1
EES04392	Sorghum	plastid	20.53	20.98
KXG29327	Sorghum	plastid	20.0	20.55
EES04394	Sorghum	endoplasmic reticulum	20.18	19.16
KXG34246	Sorghum	cytosol	22.83	17.94

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:8070050	MapMan:9.1.4.2	UniProt:A0A1Z5S906	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:OQU92401
ProteinID:OQU92401	ProteinID:OQU92401.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF7
EnsemblPlantsGene:SORBI_3001G339000	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0001A82075	RefSeq:XP_002465137.1	:	:

Description

hypothetical protein

Coordinates

chr1:+:62697525..62704522

Molecular Weight (calculated)

66739.7 Da

IEP (calculated)

4.928

GRAVY (calculated)

-0.404

Length

565 amino acids

Sequence
(BLAST)

001: MAAAREVDDD SMGCRVIAQG YKVLDEERHA VDYRPSVWGD YFIKNPTLPH TYEKSVEWMK ERRDVLINEA KNTLTGKHDD GPLAEMKLVD AVQRLGIAYH
101: FQDEIHASLQ KLKSMEFRNE SFHEISLQFW LLRQDRYYVS CDVFQSFMDN QQNLNVSLQS DVRALLALYE AAHLGTPNEQ FLIEAQRQTT SLLRSMVDHL
201: EKPLADKVRH ALQTPSFRRM KRLEARLYIP LYEEDKEDCD ELILELAKLD FYLLQQIHRE EVKEICEWYH GLDSPRKLFY ARHRPAEAYF WALGVYYEPQ
301: YAKARKLLAK FIATITPYDD TFDNYGMWEE LQPFADVMQR WDMKEAEGLN ECYSDFARFM FGTMIEIENA LPKDIGRRNV NFIRDIINEV CKGYVTEIGW
401: RDSKYIPLLE EHLKVTLITC FYWAINCTAF VVFEENVTEE ILKWMSKFPQ IVKDSCIISR LMDDIVAHEF ETERNNVATA VTCYMNEYKT TKEEASDVLW
501: NSVEHAWKSM NHEYLTWTSL PSSLLIRVIN LARMMETMYK EIDGYTDSKL LKEWISKLLD EPIPF

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.