Factsheet for HORVU5Hr1G005860.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	88.26	90.02
HORVU7Hr1G122730.1	Barley	cytosol	71.71	79.8
Zm00001d029523_P001	Maize	cytosol	66.01	73.32
OQU92401	Sorghum	cytosol	72.95	72.57
TraesCS7A01G499300.2	Wheat	cytosol	61.57	62.79
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	16.19	36.26
HORVU5Hr1G004510.1	Barley	cytosol	9.96	27.72
HORVU2Hr1G003420.1	Barley	plastid	24.38	24.16
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	25.27	24.03
HORVU2Hr1G003360.2	Barley	plastid	24.56	24.0
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	21.0	23.18
HORVU2Hr1G003390.1	Barley	plastid	23.84	22.56
HORVU6Hr1G012270.1	Barley	plastid	20.82	21.51
HORVU6Hr1G012090.1	Barley	cytosol	13.7	20.32
HORVU6Hr1G012170.1	Barley	plastid	19.75	20.22
HORVU6Hr1G012110.1	Barley	plastid	19.39	18.08

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A287Q885	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:HORVU5Hr1G005860	EnsemblPlants:HORVU5Hr1G005860.1	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF7	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B461343

Description

No Description!

Coordinates

chrchr5H:-:9469326..9483847

Molecular Weight (calculated)

66354.6 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.406

Length

562 amino acids

Sequence
(BLAST)

001: MAKAGGERQA GYGRVIAQGY TVLDERRHAV DYRLSVWGDY FIRNPALPHT HQNSIEWMTE RRDKLVLEAR DKLLTLCDPL AELKMIDALQ RLGVSYHFKE
101: EIDLKLHKLS SQKFDCENLH GISLQFRLLR QDGCYMSCDV FQSFMQNQED FEATMQRDAR ALLALYEATH LGTPDEQFLE DAQRKTTSLL KSRIDRLEKP
201: LADKVKHALE TPCFRRMKIL EARLYILLYQ KDTEECNETL DELAKLNFYL LQRLYREEVR EICEWYYEKE SPRRLFYARH RPVESYFWAL GVYYEPQYAK
301: ARKFLAKFIA TITPYDDTFD NYGVWEELQP FANVMQRWDM KEVEQLGECY EDYARFMFGT MIEIENALPK DIATRNVNFI KNIINEVCKG YLTEIYWRDN
401: KYIPPLEDHL KVTLVTSFYW ATSCTAFVVS EENITEEVLQ WMSKFPQIVK DSCIVARLMD DIVAHELETE KNNVATVVTC YMKEYGTTKE VASESLWEVV
501: ENAWKDMNKE FLTMTDIPSS LLIRVINLAR MMETMYKEID GYTDSAILKN RTSLLLEQPM TF

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.