Factsheet for HORVU6Hr1G012170.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067800.1	Wheat	plastid	90.71	90.71
TraesCS6D01G065200.1	Wheat	plastid	89.07	89.72
TraesCS6D01G048600.1	Wheat	plastid	88.71	89.36
TraesCS6B01G092800.1	Wheat	plastid	88.89	88.89
TraesCS6B01G091700.1	Wheat	plastid	86.34	86.65
HORVU6Hr1G012090.1	Barley	cytosol	55.37	80.21
HORVU6Hr1G012110.1	Barley	plastid	83.61	76.12
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	61.93	66.8
HORVU6Hr1G012270.1	Barley	plastid	64.48	65.07
KXG29327	Sorghum	plastid	62.48	62.36
EES04391	Sorghum	cytosol	47.36	62.35
Os10t0489500-00	Rice	cytosol	57.74	62.04
EES04392	Sorghum	plastid	60.66	60.22
Zm00001d053918_P001	Maize	cytosol	31.33	60.14
Zm00001d053916_P002	Maize	cytosol	48.45	59.78
EES04390	Sorghum	plastid	59.38	57.8
Os02t0121700-01	Rice	plastid	61.93	57.14
EES04394	Sorghum	endoplasmic reticulum	60.47	55.8
Zm00001d015053_P001	Maize	plastid	57.74	54.56
Zm00001d015054_P001	Maize	plastid	55.37	52.96
Solyc10g005420.1.1	Tomato	cytosol	7.65	51.22
GSMUA_Achr2P03420_001	Banana	cytosol	38.8	44.19
GSMUA_Achr9P21010_001	Banana	cytosol	36.98	42.38
VIT_00s0372g00060.t01	Wine grape	cytosol	14.39	42.25
PGSC0003DMT400029354	Potato	cytosol	21.86	41.96
PGSC0003DMT400029275	Potato	cytosol	20.58	41.7
VIT_00s0572g00010.t01	Wine grape	cytosol	33.7	41.11
VIT_00s0271g00030.t01	Wine grape	cytosol	36.07	41.08
PGSC0003DMT400029266	Potato	cytosol	30.42	40.05
VIT_00s0266g00020.t01	Wine grape	cytosol	35.52	40.04
VIT_00s0372g00020.t01	Wine grape	cytosol	29.33	39.66
VIT_00s0271g00010.t01	Wine grape	cytosol	35.52	39.63
VIT_00s0266g00010.t01	Wine grape	cytosol	35.88	38.86
VIT_00s0372g00040.t01	Wine grape	cytosol	35.88	38.86
VIT_00s0572g00020.t01	Wine grape	cytosol	35.88	38.86
VIT_00s0847g00020.t01	Wine grape	cytosol	28.96	38.69
PGSC0003DMT400029265	Potato	cytosol	34.79	37.23
VIT_00s0266g00070.t01	Wine grape	cytosol	34.61	36.75
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.25	36.4
VIT_00s0385g00020.t01	Wine grape	cytosol	32.97	35.63
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.97	34.69
Solyc05g026590.1.1	Tomato	cytosol	18.03	34.49
KRH21637	Soybean	cytosol	33.52	34.46
Solyc10g005390.2.1	Tomato	cytosol	34.79	33.93
KRH49914	Soybean	plastid	33.52	32.11
KRH49915	Soybean	plastid	32.97	30.78
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.07	30.7
Solyc10g005410.2.1	Tomato	plastid	34.43	30.05
KRH41974	Soybean	cytosol	15.85	29.9
AT1G61680.1	Thale cress	plastid	30.6	29.53
HORVU2Hr1G003420.1	Barley	plastid	26.23	25.4
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	27.14	25.21
HORVU2Hr1G003360.2	Barley	plastid	25.68	24.52
HORVU2Hr1G003390.1	Barley	plastid	25.87	23.91
HORVU5Hr1G004510.1	Barley	cytosol	7.47	20.3
HORVU5Hr1G005860.1	Barley	cytosol	20.22	19.75
HORVU7Hr1G122730.1	Barley	cytosol	17.85	19.41

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A287TC03	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
EnsemblPlantsGene:HORVU6Hr1G012170	EnsemblPlants:HORVU6Hr1G012170.1	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B48547E	SEG:seg	:

Description

No Description!

Coordinates

chrchr6H:+:23200249..23204363

Molecular Weight (calculated)

63240.8 Da

IEP (calculated)

6.579

GRAVY (calculated)

-0.316

Length

549 amino acids

Sequence
(BLAST)

001: MAAAHVFFSF SVQPLHHSAS PVAGNGGRSG PNRAFFRPST VICPGREPAS HELSHDFDFQ ESLTNVQALL HQHPTSRRGL LTTVDHLKRL CIDHYFQDEI
101: DTIMGSCTDL IHSNDLLDAT LSLRLMREAG YYVSADDVLR KFKNDNGEFN IGLSKDIRGL LSLQDMSHLN VGESSLYKAN EFSSKHLRNA IKYLEPNLGR
201: YVRRSLDHPY HVSQMQYKAR HHLSYLQNMP TRNMAIENLA LAEFTIKKLQ HQWEMQEVKR WWMDLGLAQE IPAARDQVLK WYMWPMTVLE GFSFSRYRIE
301: ITKVISMVYI VDDIFDLVAT QEELSLFNEA IKMWDLAAVD SLPSYMISCY KAIYTITCDI ADMVRKEHGV NPINHLKKEW ATLFDGFVIE GKWLSTDQIP
401: TSEDYLRNGI ITSGAPLLFM HLFFMLGHEL NEGKNDDIHR VISYPAKIMR LWDDMGTAKD ESQNGLDGSY KELYQRENPR GDAKKHMLEM IGSEWEGLNR
501: VCFCGTKSTL SHSFITASLN FARMVRVMYG YDNEQKLPVL EDYTKMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.