Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005420.1.1 | Tomato | cytosol | 20.91 | 73.17 |
| Solyc01g105940.2.1 | Tomato | cytosol | 14.63 | 40.0 |
| Solyc10g005390.2.1 | Tomato | cytosol | 75.61 | 38.54 |
| Solyc10g005410.2.1 | Tomato | plastid | 74.56 | 34.02 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 19.16 | 32.35 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 17.77 | 30.0 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 42.86 | 29.93 |
| Solyc01g105850.2.1 | Tomato | cytosol | 28.57 | 29.5 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 47.04 | 28.01 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 47.74 | 27.96 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 46.34 | 27.03 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 47.39 | 26.77 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 44.6 | 26.28 |
| KRH41974 | Soybean | cytosol | 26.48 | 26.12 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 45.99 | 25.53 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 43.55 | 24.65 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 43.55 | 24.65 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 43.55 | 24.65 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 48.78 | 24.26 |
| Solyc01g101220.1.1 | Tomato | cytosol | 13.94 | 23.81 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 37.28 | 23.78 |
| Solyc01g105960.2.1 | Tomato | cytosol | 28.57 | 23.16 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 32.4 | 22.91 |
| KRH21637 | Soybean | cytosol | 42.16 | 22.66 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 34.84 | 20.88 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 33.1 | 19.71 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 44.25 | 19.69 |
| KRH49914 | Soybean | plastid | 39.02 | 19.55 |
| KRH49915 | Soybean | plastid | 39.72 | 19.39 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 31.01 | 18.94 |
| TraesCS6A01G067800.1 | Wheat | plastid | 35.19 | 18.4 |
| TraesCS6D01G065200.1 | Wheat | plastid | 34.84 | 18.35 |
| TraesCS6D01G048600.1 | Wheat | plastid | 34.49 | 18.17 |
| HORVU6Hr1G012170.1 | Barley | plastid | 34.49 | 18.03 |
| TraesCS6B01G092800.1 | Wheat | plastid | 34.49 | 18.03 |
| TraesCS6D01G065100.1 | Wheat | plastid | 34.49 | 18.0 |
| EES04391 | Sorghum | cytosol | 25.44 | 17.51 |
| KXG29327 | Sorghum | plastid | 33.45 | 17.45 |
| TraesCS6A01G067500.1 | Wheat | plastid | 31.01 | 17.45 |
| TraesCS6B01G091500.1 | Wheat | plastid | 33.45 | 17.42 |
| TraesCS6B01G091700.1 | Wheat | plastid | 33.1 | 17.37 |
| EES04390 | Sorghum | plastid | 33.8 | 17.2 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 30.31 | 17.09 |
| TraesCS2B01G501400.1 | Wheat | plastid | 32.75 | 17.09 |
| TraesCSU01G116600.1 | Wheat | plastid | 32.75 | 17.09 |
| TraesCSU01G116700.1 | Wheat | plastid | 32.75 | 17.09 |
| TraesCS6A01G067700.1 | Wheat | plastid | 32.75 | 17.09 |
| TraesCS6B01G091400.1 | Wheat | plastid | 33.45 | 17.08 |
| Zm00001d015053_P001 | Maize | plastid | 34.49 | 17.04 |
| Os10t0489500-00 | Rice | cytosol | 30.31 | 17.03 |
| TraesCS2D01G477300.1 | Wheat | plastid | 33.45 | 16.99 |
| TraesCS6B01G092000.1 | Wheat | plastid | 31.71 | 16.76 |
| TraesCS6B01G091100.1 | Wheat | plastid | 32.06 | 16.73 |
| Zm00001d015054_P001 | Maize | plastid | 33.45 | 16.72 |
| TraesCS6B01G090800.1 | Wheat | plastid | 31.71 | 16.58 |
| TraesCS6B01G091300.1 | Wheat | plastid | 31.71 | 16.55 |
| AT1G61680.1 | Thale cress | plastid | 32.75 | 16.52 |
| TraesCS6B01G090500.1 | Wheat | plastid | 32.06 | 16.49 |
| EES04392 | Sorghum | plastid | 31.71 | 16.46 |
| HORVU6Hr1G012110.1 | Barley | plastid | 34.49 | 16.42 |
| TraesCS6A01G067600.1 | Wheat | plastid | 31.36 | 16.36 |
| HORVU6Hr1G012270.1 | Barley | plastid | 31.01 | 16.36 |
| Solyc02g079840.1.1 | Tomato | cytosol | 30.66 | 16.36 |
| TraesCSU01G116900.1 | Wheat | plastid | 31.71 | 16.22 |
| Zm00001d053916_P002 | Maize | cytosol | 25.09 | 16.18 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 30.66 | 16.18 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 30.66 | 16.15 |
| EES04394 | Sorghum | endoplasmic reticulum | 33.1 | 15.97 |
| Solyc01g101190.2.1 | Tomato | cytosol | 30.66 | 15.94 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 23.34 | 15.69 |
| Solyc01g105920.2.1 | Tomato | plastid | 32.06 | 15.54 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 10.1 | 15.51 |
| Os02t0121700-01 | Rice | plastid | 32.06 | 15.46 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 19.86 | 15.04 |
| Solyc01g105880.2.1 | Tomato | mitochondrion, plastid | 30.66 | 14.92 |
| Solyc01g105870.2.1 | Tomato | plastid | 31.36 | 14.83 |
| Solyc01g105890.2.1 | Tomato | plastid | 31.36 | 14.78 |
| Solyc01g105900.2.1 | Tomato | plastid | 25.78 | 13.83 |
| Solyc03g007730.1.1 | Tomato | cytosol | 24.74 | 12.63 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 22.3 | 11.7 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 13.59 | 11.34 |
| Zm00001d053918_P001 | Maize | cytosol | 9.76 | 9.79 |
| Solyc01g105860.2.1 | Tomato | cytosol | 0.35 | 0.46 |
| Solyc01g105950.2.1 | Tomato | extracellular | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | UniProt:K4C039 | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 |
| PANTHER:PTHR31225:SF0 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | EnsemblPlantsGene:Solyc05g026590.1 | EnsemblPlants:Solyc05g026590.1.1 | InterPro:Terpene_synth_N |
| InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI00027660AF | SEG:seg | : |
Description
No Description!
Coordinates
chr5:+:42102044..42103833
Molecular Weight (calculated)
33194.7 Da
IEP (calculated)
6.671
GRAVY (calculated)
-0.256
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGFNSTKF AGLVKDVKYS LMTERNTNNL VLVDTLQRMG IEYHFQEEIE SILHKEYDQS ACFLKYQTPF DVSLCFKLLR QEGYHVSADV FKKFKNSDDS
101: LRQDISGLIG LYEAAQLGVE GKHILDEVAK FSSDHLNACL AHNDSCDQAT IIKETLKYPY HKSLASYKAK SFINNFKGIN GCGRTTLQEL ANIHYSIKRE
201: IHQHELIQIS RWWRSLGLAE DLKLLRDQPL KWYAWPMAMI TDPIISQQRI EIAKCFSFIY VIDDIFDIYG TVEGLALFTQ AINRYFT
101: LRQDISGLIG LYEAAQLGVE GKHILDEVAK FSSDHLNACL AHNDSCDQAT IIKETLKYPY HKSLASYKAK SFINNFKGIN GCGRTTLQEL ANIHYSIKRE
201: IHQHELIQIS RWWRSLGLAE DLKLLRDQPL KWYAWPMAMI TDPIISQQRI EIAKCFSFIY VIDDIFDIYG TVEGLALFTQ AINRYFT
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.