Factsheet for Solyc01g105850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105940.2.1	Tomato	cytosol	24.82	65.71
Solyc01g105960.2.1	Tomato	cytosol	50.0	39.27
PGSC0003DMT400015998	Potato	plastid	80.22	38.38
Solyc10g005420.1.1	Tomato	cytosol	10.79	36.59
Solyc01g101220.1.1	Tomato	cytosol	21.94	36.31
Solyc01g105870.2.1	Tomato	plastid	75.54	34.6
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	67.99	32.03
Solyc01g105920.2.1	Tomato	plastid	67.99	31.93
Solyc01g105890.2.1	Tomato	plastid	66.19	30.21
Solyc01g105900.2.1	Tomato	plastid	55.76	28.97
Solyc05g026590.1.1	Tomato	cytosol	29.5	28.57
KRH25917	Soybean	plastid	27.34	26.95
Solyc02g079840.1.1	Tomato	cytosol	47.84	24.72
Solyc01g101190.2.1	Tomato	cytosol	42.09	21.2
Solyc02g079890.1.1	Tomato	cytosol, plastid	35.61	18.1
Solyc03g007730.1.1	Tomato	cytosol	33.81	16.73
Solyc10g005390.2.1	Tomato	cytosol	33.45	16.52
Solyc10g005410.2.1	Tomato	plastid	33.09	14.63
Solyc01g105860.2.1	Tomato	cytosol	0.72	0.92
Solyc01g105950.2.1	Tomato	extracellular	0.36	0.66
GSMUA_Achr4P07690_001	Banana	cytosol	0.36	0.58

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4B2F5	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc01g105850.2	EnsemblPlants:Solyc01g105850.2.1	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000276915B	SEG:seg	:

Description

No Description!

Coordinates

chr1:+:93878851..93882363

Molecular Weight (calculated)

32692.1 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.443

Length

278 amino acids

Sequence
(BLAST)

001: MMMTVEGSQD EELEKLELID NLERLGVSYH FKDEIMQILK SIHEQKITST DNSLYSTALK FRLLRQHGFH ISQDILNDFK DDQGNFKQSH CEDTKGLLQL
101: YEASFLSTES ETLESANTFA TSHLKDYLHN LKGDDQENWR IELVRHALEL PLRCKMLRVE TRWYIDIYEK IPNANPLLPE LAKLDFNILQ ATHQQDLKNL
201: SRWWNKSLLA EKLPFTRDRI VESLLWIAGM MFEPQKNDYC RTMLTKVLAM VTVIDDIYDV YGTLDELEIF TDAVQRHT

Best Arabidopsis Sequence Match ( AT3G25820.3 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VEKLRNILPF FGQSIGYFAA VPWSTTRPLL QKSST

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.