Factsheet for Solyc01g105960.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g105940.2.1	Tomato	cytosol	17.8	60.0
Solyc01g105850.2.1	Tomato	cytosol	39.27	50.0
VIT_13s0067g00300.t01	Wine grape	cytosol	21.19	47.47
VIT_13s0067g03830.t01	Wine grape	plastid	48.02	38.64
VIT_00s0724g00010.t01	Wine grape	cytosol	43.22	35.83
Solyc01g101220.1.1	Tomato	cytosol	16.1	33.93
VIT_13s0067g00130.t01	Wine grape	plastid	49.72	33.78
VIT_13s0067g03700.t01	Wine grape	cytosol	51.41	32.16
VIT_13s0084g00010.t01	Wine grape	cytosol	50.0	32.12
VIT_00s2271g00010.t01	Wine grape	cytosol	34.18	30.63
Solyc10g005420.1.1	Tomato	cytosol	7.06	30.49
Solyc02g079840.1.1	Tomato	cytosol	45.48	29.93
Solyc01g105920.2.1	Tomato	plastid	49.44	29.56
VIT_13s0067g00370.t01	Wine grape	plastid	49.15	29.49
VIT_13s0019g00060.t01	Wine grape	plastid	48.59	28.96
Solyc05g026590.1.1	Tomato	cytosol	23.16	28.57
Solyc01g105870.2.1	Tomato	plastid	48.59	28.34
VIT_13s0067g03790.t01	Wine grape	plastid	47.46	28.33
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	46.89	28.14
Solyc01g105890.2.1	Tomato	plastid	48.31	28.08
Solyc01g105900.2.1	Tomato	plastid	42.09	27.85
VIT_13s0067g03740.t01	Wine grape	cytosol	31.92	26.78
VIT_13s0067g03770.t01	Wine grape	cytosol	22.88	23.34
VIT_13s0067g00090.t01	Wine grape	cytosol	22.88	23.14
Solyc02g079890.1.1	Tomato	cytosol, plastid	35.03	22.67
Solyc01g101190.2.1	Tomato	cytosol	32.77	21.01
Solyc03g007730.1.1	Tomato	cytosol	32.49	20.46
Solyc10g005390.2.1	Tomato	cytosol	27.68	17.41
Solyc10g005410.2.1	Tomato	plastid	27.68	15.58
Solyc01g105950.2.1	Tomato	extracellular	0.85	1.97
GSMUA_Achr4P07690_001	Banana	cytosol	0.85	1.75
VIT_13s0067g00320.t01	Wine grape	cytosol	0.56	1.69
Solyc01g105860.2.1	Tomato	cytosol	0.85	1.38

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:K4B2G5	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc01g105960.2	EnsemblPlants:Solyc01g105960.2.1
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002767522	:

Description

No Description!

Coordinates

chr1:+:93968173..93969911

Molecular Weight (calculated)

41911.0 Da

IEP (calculated)

6.061

GRAVY (calculated)

-0.446

Length

354 amino acids

Sequence
(BLAST)

001: MSISKSNLIS KLEVPKSCIS NVPIRRSGNY QPSIWDYNHI QSLKNHYSDE KFMRRRNELK MEVKIMLSDR NMKQLEQLEI IDNLQRLGLS YHFEDEIYSI
101: LNNLSDKGSK RDHLYAKALE FRLLRQHGFN IVSQETFGGF YDNTTGFGEI HHNEDTKGML YLYEASFLAI EGEKELELAR NLTEEHLREY LADQNKNDVD
201: QNLVELVHHA LELPLHWRML RLETKWFINY YKKRQDKMIP FLLELATLDF NIVQAAHIED LKYVARWWKE TCLAENLPFA RDRLVENFFW TIGVNFLPQY
301: GYFRRIATKV NALVTTIDDV YDVFGTLDEL QIFTHAIERI PDGVSTNWID SQTI

Best Arabidopsis Sequence Match ( AT3G25820.3 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VEKLRNILPF FGQSIGYFAA VPWSTTRPLL QKSST

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.