Factsheet for Solyc10g005390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400029354	Potato	cytosol	46.18	90.91
Solyc10g005420.1.1	Tomato	cytosol	11.9	81.71
Solyc05g026590.1.1	Tomato	cytosol	38.54	75.61
Solyc10g005410.2.1	Tomato	plastid	77.62	69.48
VIT_00s0372g00060.t01	Wine grape	cytosol	19.18	57.75
VIT_00s0572g00010.t01	Wine grape	cytosol	42.98	53.78
VIT_00s0372g00020.t01	Wine grape	cytosol	37.83	52.46
VIT_00s0271g00030.t01	Wine grape	cytosol	44.58	52.07
VIT_00s0271g00010.t01	Wine grape	cytosol	45.47	52.03
VIT_00s0266g00020.t01	Wine grape	cytosol	44.41	51.33
VIT_00s0266g00010.t01	Wine grape	cytosol	45.47	50.49
VIT_00s0847g00020.t01	Wine grape	cytosol	36.77	50.37
VIT_00s0572g00020.t01	Wine grape	cytosol	45.29	50.3
VIT_00s0372g00040.t01	Wine grape	cytosol	45.12	50.1
VIT_00s0266g00070.t01	Wine grape	cytosol	43.34	47.2
VIT_00s0385g00020.t01	Wine grape	cytosol	41.56	46.06
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	46.36	45.23
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	39.08	44.9
GSMUA_Achr2P03420_001	Banana	cytosol	37.12	43.36
GSMUA_Achr9P21010_001	Banana	cytosol	36.77	43.22
KRH21637	Soybean	cytosol	40.5	42.7
KRH49914	Soybean	plastid	42.81	42.06
Zm00001d053918_P001	Maize	cytosol	21.14	41.61
EES04391	Sorghum	cytosol	30.55	41.25
Solyc01g105940.2.1	Tomato	cytosol	7.64	40.95
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	46.54	40.62
KRH41974	Soybean	cytosol	20.78	40.21
TraesCS6A01G067300.1	Wheat	cytosol	33.21	39.79
HORVU6Hr1G012090.1	Barley	cytosol	26.64	39.58
AT1G61680.1	Thale cress	plastid	39.96	39.54
KRH49915	Soybean	plastid	39.96	38.27
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	33.39	36.94
TraesCS7A01G261500.1	Wheat	cytosol	11.01	36.47
TraesCS6B01G091200.1	Wheat	cytosol	11.01	36.47
Zm00001d053916_P002	Maize	cytosol	28.77	36.4
TraesCS2A01G478100.1	Wheat	cytosol	22.2	36.34
TraesCS6B01G091000.1	Wheat	cytosol	27.53	36.3
TraesCS6D01G065100.1	Wheat	plastid	35.35	36.18
TraesCS6A01G067500.1	Wheat	plastid	32.68	36.08
TraesCS6B01G091500.1	Wheat	plastid	34.99	35.75
TraesCS6A01G067800.1	Wheat	plastid	34.81	35.7
TraesCS6D01G065200.1	Wheat	plastid	34.46	35.6
EES04390	Sorghum	plastid	35.52	35.46
TraesCS6D01G048600.1	Wheat	plastid	34.28	35.41
KXG29327	Sorghum	plastid	34.46	35.27
TraesCS6B01G091400.1	Wheat	plastid	34.99	35.05
HORVU6Hr1G012170.1	Barley	plastid	33.93	34.79
TraesCS2B01G501400.1	Wheat	plastid	33.93	34.73
TraesCS6A01G067700.1	Wheat	plastid	33.93	34.73
TraesCS6B01G092000.1	Wheat	plastid	33.39	34.62
TraesCS6B01G090800.1	Wheat	plastid	33.75	34.61
TraesCS6B01G092800.1	Wheat	plastid	33.75	34.61
TraesCSU01G116700.1	Wheat	plastid	33.75	34.55
TraesCSU01G116600.1	Wheat	plastid	33.75	34.55
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	33.39	34.5
TraesCS6B01G090500.1	Wheat	plastid	34.1	34.41
HORVU6Hr1G012270.1	Barley	plastid	33.21	34.38
TraesCS6B01G091700.1	Wheat	plastid	33.39	34.37
TraesCS2D01G477300.1	Wheat	plastid	34.46	34.34
TraesCS6B01G091100.1	Wheat	plastid	33.39	34.18
TraesCS6A01G067600.1	Wheat	plastid	33.39	34.18
TraesCS6B01G091300.1	Wheat	plastid	33.21	34.0
HORVU6Hr1G012110.1	Barley	plastid	36.41	34.0
EES04392	Sorghum	plastid	33.04	33.63
TraesCSU01G116900.1	Wheat	plastid	33.39	33.51
Solyc01g105850.2.1	Tomato	cytosol	16.52	33.45
Zm00001d015054_P001	Maize	plastid	33.75	33.1
Zm00001d015053_P001	Maize	plastid	33.93	32.87
Os10t0489500-00	Rice	cytosol	29.48	32.49
Os02t0121700-01	Rice	plastid	34.28	32.44
TraesCS7D01G540300.1	Wheat	cytosol, plastid	31.26	32.35
EES04394	Sorghum	endoplasmic reticulum	32.86	31.09
Solyc01g105860.2.1	Tomato	cytosol	11.55	29.82
Solyc01g101220.1.1	Tomato	cytosol	8.88	29.76
Solyc02g079840.1.1	Tomato	cytosol	28.42	29.74
Solyc01g105950.2.1	Tomato	extracellular	7.99	29.61
Solyc01g105920.2.1	Tomato	plastid	29.48	28.04
Solyc01g105880.2.1	Tomato	mitochondrion, plastid	29.13	27.8
Solyc01g105960.2.1	Tomato	cytosol	17.41	27.68
Solyc01g105890.2.1	Tomato	plastid	28.95	26.77
Solyc01g105900.2.1	Tomato	plastid	25.4	26.73
Solyc01g105870.2.1	Tomato	plastid	28.77	26.69
Solyc01g101190.2.1	Tomato	cytosol	25.58	26.09
Solyc03g007730.1.1	Tomato	cytosol	25.4	25.44
Solyc02g079890.1.1	Tomato	cytosol, plastid	22.74	23.4

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ProteinID:AEP82767.1	UniProt:G5CV39	GO:GO:0000287
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333
GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	EnsemblPlantsGene:Solyc10g005390.2
EnsemblPlants:Solyc10g005390.2.1	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI00022CC6C5	SEG:seg	:	:	:	:

Description

Linalool/nerolidol synthase [Source:UniProtKB/TrEMBL;Acc:G5CV39]

Coordinates

chr10:+:291598..294853

Molecular Weight (calculated)

64968.5 Da

IEP (calculated)

6.039

GRAVY (calculated)

-0.367

Length

563 amino acids

Sequence
(BLAST)

001: MEMTKVLISP SQYLSMHIIS GNIIQNERSI QVSCKSSNKW AVQEDLLRAT STYNQDGFDS TKFGLLMKDV KYALRTQINN NNNLVLVDTL QRMGIEHHFQ
101: QEIQSILQKE YEQNTCFLKY QNHHDISLCF RLLRQEGYHV SADVFKKLKN NDDGTFGLNL NQDVNGLIGL YEASQLGVEG EYILDEIAKF SGDHLNACLV
201: NSDEARIIKE TLKYPYHKSL SRWKAKSFIN NFKGINGWGK STLQELANMD YSITKEIHQH ELIQVSRWWS SLGLAEDLKL LRDQPLKWYT WPMTMLTDPK
301: MSQQRIELAK CISFVYVVDD IFDVYGTIEE LTLFTQAVNR WELCVMKDLP EYMRATYKAL YDTINSIGYN IYKIYGQNPT QNLRNAWANL CNAFLKEAKW
401: FASGELPTTD EYLKNGLVSS GVHVVLVHMF YLLGFGLNNQ NSIYLEDSSA MASSVATILR LWDDLGSAKD ENQEGNDGSY IECYMKGQKN ASIELAREYV
501: VKLIEDEWKQ LNKKHFNLMN GSLGSYSKAS LNLARMVPLM YNYDDKQSLH VLQEYINTML YDV

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.