Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 83.12 | 89.0 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 54.31 | 69.32 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 21.28 | 68.24 |
| TraesCS6B01G092000.1 | Wheat | plastid | 67.34 | 67.59 |
| TraesCS6B01G090800.1 | Wheat | plastid | 67.89 | 67.4 |
| TraesCS6B01G091500.1 | Wheat | plastid | 68.07 | 67.33 |
| TraesCS6B01G091100.1 | Wheat | plastid | 66.79 | 66.18 |
| TraesCS6B01G091400.1 | Wheat | plastid | 68.07 | 66.01 |
| TraesCS2B01G501400.1 | Wheat | plastid | 66.42 | 65.82 |
| TraesCS6B01G091300.1 | Wheat | plastid | 66.42 | 65.82 |
| TraesCS6B01G092800.1 | Wheat | plastid | 66.24 | 65.76 |
| EES04391 | Sorghum | cytosol | 49.72 | 64.99 |
| TraesCS6B01G091700.1 | Wheat | plastid | 65.14 | 64.9 |
| TraesCS6B01G090500.1 | Wheat | plastid | 65.5 | 63.98 |
| KXG29327 | Sorghum | plastid | 62.02 | 61.45 |
| Os10t0489500-00 | Rice | cytosol | 56.51 | 60.27 |
| Zm00001d053916_P002 | Maize | cytosol | 49.17 | 60.22 |
| Zm00001d053918_P001 | Maize | cytosol | 31.56 | 60.14 |
| EES04392 | Sorghum | plastid | 60.92 | 60.04 |
| EES04390 | Sorghum | plastid | 60.37 | 58.33 |
| Os02t0121700-01 | Rice | plastid | 60.92 | 55.8 |
| EES04394 | Sorghum | endoplasmic reticulum | 60.55 | 55.46 |
| Zm00001d015053_P001 | Maize | plastid | 58.9 | 55.25 |
| Zm00001d015054_P001 | Maize | plastid | 56.51 | 53.66 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 16.33 | 47.59 |
| Solyc10g005420.1.1 | Tomato | cytosol | 7.16 | 47.56 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 39.45 | 44.61 |
| PGSC0003DMT400029275 | Potato | cytosol | 22.02 | 44.28 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 32.11 | 43.1 |
| PGSC0003DMT400029354 | Potato | cytosol | 22.57 | 43.01 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 37.8 | 43.01 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 37.25 | 41.68 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 37.61 | 41.67 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 34.31 | 41.56 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 36.7 | 41.49 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 30.09 | 39.9 |
| PGSC0003DMT400029266 | Potato | cytosol | 30.28 | 39.57 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 36.51 | 39.25 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 36.51 | 39.25 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 36.51 | 39.25 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 35.78 | 37.72 |
| PGSC0003DMT400029265 | Potato | cytosol | 35.23 | 37.43 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 34.68 | 37.2 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 38.53 | 36.4 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 32.66 | 36.33 |
| KRH49914 | Soybean | plastid | 35.41 | 33.68 |
| Solyc10g005390.2.1 | Tomato | cytosol | 34.5 | 33.39 |
| KRH21637 | Soybean | cytosol | 32.66 | 33.33 |
| KRH41974 | Soybean | cytosol | 17.61 | 32.99 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 36.88 | 31.16 |
| Solyc05g026590.1.1 | Tomato | cytosol | 16.15 | 30.66 |
| KRH49915 | Soybean | plastid | 33.03 | 30.61 |
| AT1G61680.1 | Thale cress | plastid | 31.19 | 29.88 |
| Solyc10g005410.2.1 | Tomato | plastid | 33.39 | 28.93 |
| TraesCS2B01G031400.1 | Wheat | cytosol | 13.39 | 27.14 |
| TraesCS2B01G031300.1 | Wheat | cytosol | 13.39 | 27.14 |
| TraesCS2B01G030900.1 | Wheat | plastid | 21.28 | 24.58 |
| TraesCS2B01G064700.1 | Wheat | cytosol, extracellular | 8.26 | 24.46 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 22.57 | 23.65 |
| TraesCS7B01G407200.1 | Wheat | cytosol | 24.95 | 23.29 |
| TraesCS2B01G032300.2 | Wheat | plastid | 24.22 | 23.28 |
| TraesCS2B01G031100.1 | Wheat | plastid | 24.22 | 23.28 |
| TraesCS2B01G031000.1 | Wheat | plastid | 23.67 | 22.67 |
| TraesCS2B01G031500.1 | Wheat | plastid | 22.02 | 22.51 |
| TraesCS6B01G008700.1 | Wheat | cytosol | 21.83 | 21.83 |
| TraesCS5B01G018200.1 | Wheat | cytosol, mitochondrion, plastid | 19.82 | 19.6 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| EnsemblPlantsGene:TraesCS6B01G413300 | EnsemblPlants:TraesCS6B01G413300.1 | : | : | : | : |
Description
No Description!
Coordinates
chr6B:-:686798893..686809684
Molecular Weight (calculated)
63138.7 Da
IEP (calculated)
6.267
GRAVY (calculated)
-0.318
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAYIFSSVS VKPLLLSALP AVTGNGARRD RHRGLFRPCP ATQDFYALSD GFNFQEGLES VKARLHQNHK NKREVLTTID HLKRLCMDHY FQDEIDNAVD
101: SCLALVHSDD LLEATLSLRL AREAKYDISA DEVLRKFTDD NGDFKIDHCK DIRGLVSLQD ISHLNMGESS LYKAKEFSRR HLTSAIRHLN PNLARYVRHS
201: LDHPYHVSLM QYKARYHLSY LQSLPTRNTA MEELAVAELY LNKLQHQKEM QEVKRWWMDL GLTREIRTAR DQVLKWYMWA MTVVQGFSLS RYRIEITKII
301: SFVYIVDDIF DLIGTQEELS LFSEAIKKWD LAAAGSLPGY MLSCYKALYT VTNEIVDMAK KEHGLNPMDQ LRNAWETLFD AFLVERKWLS SNQVPSPEDY
401: LRNGIITSGV PLIFLHLFFM LGHDSIELDG NNIPRVIYSS AKIVRLRDDM GSAKDEVQEG FDGSYKEMYL RENPHADVEE HMLEMITKEW EELNRECFSR
501: TRSSCLSPSF LLASLNLARM TNIIYGYDNE QRLPVLEDYI GMLLL
101: SCLALVHSDD LLEATLSLRL AREAKYDISA DEVLRKFTDD NGDFKIDHCK DIRGLVSLQD ISHLNMGESS LYKAKEFSRR HLTSAIRHLN PNLARYVRHS
201: LDHPYHVSLM QYKARYHLSY LQSLPTRNTA MEELAVAELY LNKLQHQKEM QEVKRWWMDL GLTREIRTAR DQVLKWYMWA MTVVQGFSLS RYRIEITKII
301: SFVYIVDDIF DLIGTQEELS LFSEAIKKWD LAAAGSLPGY MLSCYKALYT VTNEIVDMAK KEHGLNPMDQ LRNAWETLFD AFLVERKWLS SNQVPSPEDY
401: LRNGIITSGV PLIFLHLFFM LGHDSIELDG NNIPRVIYSS AKIVRLRDDM GSAKDEVQEG FDGSYKEMYL RENPHADVEE HMLEMITKEW EELNRECFSR
501: TRSSCLSPSF LLASLNLARM TNIIYGYDNE QRLPVLEDYI GMLLL
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.